Gene Lferr_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0912 
Symbol 
ID6876877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp875159 
End bp875557 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content48% 
IMG OID642788792 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002219367 
Protein GI198283046 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCCC AACGCCGGCC CCGCAAAAAA GGGCGTGTCG AAATCATTCC GATGATTGAC 
GTTATGCTGT TCCTGCTGGT TTTTTTCATC ATGATTACTT TGCAGATGAT TACGGATAAG
GGGTTAAAAC TGGACTTGCC CACATCCAGT GAGACGAAAG TACTGCCGCA TCCGCATTTC
GTGCTCAATA TCGTGAAGGA TGGCGGTGTT GTGGTGAAGG GCAAAAAAAT GAGCCTGGAT
CAATTGCAGA ATTTTCTTGT CGGCGATGGC GATGCCAAGC ACACGCAGGT GACGATCGCT
GCTGATAAAA TGGTTCCTTT TAAAGATTTT GTGCATGTGA TGGATGCTTG TCAAAAAGCG
GGTGTAACCA GCATTGGTAT TGCGGCGAAG CCCGCGTGA
 
Protein sequence
MLPQRRPRKK GRVEIIPMID VMLFLLVFFI MITLQMITDK GLKLDLPTSS ETKVLPHPHF 
VLNIVKDGGV VVKGKKMSLD QLQNFLVGDG DAKHTQVTIA ADKMVPFKDF VHVMDACQKA
GVTSIGIAAK PA