| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0878 |
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| Symbol | |
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| ID | 6876843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 834559 |
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| End bp | 838986 |
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| Gene Length | 4428 bp |
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| Protein Length | 1475 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788760 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_002219335 |
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| Protein GI | 198283014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA GCTTATACTC CTCCGATTTT GAACGGGACT CCTGTGGCTT CGGGCTGATT
GCCCAGATGG ACAACCAGGC CAGTCACGCC ATCGTCGCGA CGGCCATCGT CTCATTGGCG
CGGCTCACCC ACCGCGGCGC CATAGCCGCC GACGGCAAAA GCGGCGACGG TTGCGGCCTG
CTGTTGCAGA TGCCGGAGGC CTTTTTCCGC GCCATCGCCG CCGAACAGGG CATCACTCTC
GGTACACACT TTGGTATCGG TCAGTTTTTC CTGCCTCGGG ACGAAACGGT TGCAAAGACT
ATTCGAACAG CCCTGGGTGT TGAAGCGGAA GATCTCGGAC TGCGCTGCCT GGGCTGGCGC
GAGGTACCTA CCGACCTTGG CGCCTGTGGT GAAGAAGCCC TGCAGAGTCT GCCGGGAATC
TGGCAGGCGT TTGTGGGCCT CCCCGACGGT ATGGATACGG ACAACCGGGA GCGCCTTCTC
TACCGCTTGC GGCGGCGGGT AGAAAAACGC TTTGCCGACG AGGGCAGTTT TTTTGCGGTG
ACCTGCTCCT CTCAGGCCAT CGGCTACAAA GGCATGGTAT TGCCGGAAAA TCTCCCGGTT
TTTTACCCCG ACCTCCGCGA CCCGCGCTTC GCCTCCGCCC TCGTCACCTA CCACCAGCGT
TTTTCCACCA ATACCTGGCC GGAATGGCGG CTGTGCCAGC CCTTCCGCAT CCTCGCCCAC
AATGGCGAGT TGAATACCGT GCAGGGCAAC CGTCTGTGGG CCAGGGCCCG CGAGGCGCAG
CTCCAGTCCG ACCTGTTACC CATGGCGGAG GTGCTGCCAG CGGTGGGCGG CGGCAGTGAT
TCCTTCAGTC TCGACAACAT GCTGGAACTG CTGGTGCAGG GCGGCATGGA CTTTTTCAAG
GCCATCCGCC TGCTGGTACC GCCCGCCTGG CATAATGTCC CGCGCATTGA ACCCGCCCTG
CGTGCCTTCT ACGAATATCA CTCCATGCGC ATGGAGGCCT GGGACGGCCC CGCCGGACTG
GTGCTCAACA CCGGGCGCAT CGCGGCCTGC GCACTGGATC GCAACGGACT GCGTCCGGCC
CGTTATGTCA TCACCAAAGA CCGGATCATC AACATCTCCT CCGAAGTGGG CGTCTTCGAC
TACGATCACC GCGACATCGT CGTGCAGGGG CGAGTCGGGC CGGGGCAACT GGTGGCGGTG
GATATGGGCA CGGGAAAATT TCTGGAGTCG GCGGACATCG ACGCGCAAAT CCAGAACAGC
CACCCCTACC GGGAATGGCT GGATCTGTAT GCCGAACATC TTGACAGCGA CGATCGGGCT
GCCACCCCGG CGTTACCGGT GAACGACCTG CTGGTCAGTG AAAAGGCCTT TGGCGTCAGC
TTTGAGGAAG AAGACCAGGT GATCCGCGTC CTCGCCGAGG GTGCCCAGGA AGCCGTCGGT
TCCATGGGTG ACGATACCCC CGTGGCGGTC CTGTCGCGGC AGACCCGGCA CATCGCCGAT
TATTTCCGAC AGCAGTTCGC CCAGGTCACC AACCCCCCCA TAGATCCCCT GCGCGAAGCG
CTGGTGATGT CCCTCAACAC GGTCATCGGC AGCGAAAGCA ATCTGTTTGC CGAGCGACCC
CAATATGCCC GGCGCATCGA AGTACACTCC CCGGTGCTCT CCGATGCCAT TTTCAGCGCC
CTCACCAGCC ACACGGAACC CGCCTTCCGC AGCCAGACCT TCGATCTCTG CTATTCCGCT
GCGGACAGCA ATCTGGGAGG GGCCATCGAG GCACTCTGCG AGGCGGTCAT CGAGGCGGTG
CGGCACGGGG CCGTCATCCT GGTGCTCTCG GATCACGCCC TGGAGCGTGA CCGGCTCTAC
ATCCCGGCGC TGATGGCGGT GGGCGCCGTC CACCATGCCC TCATCGATGC CGGCCTGCGC
ACCCGCTGCA ACATCGTGGC AGCCACGGCC CATGCCCGCG ATCCCCACCA GTTCGCCACC
CTGATCGGTT ATGGCGCCAC TGCCATCTAC CCCTACCTGA GCTATGCCAT CATCCGCAGC
CTGGCCGAAC GGCACGCCTT CAGCCAGCCG GTGACGGCTC TCAAGGCACT GGAAAATTAT
CGCAAGGGCA TCGACAAGGG CCTCTATAAG ATCCTCTCGA AAATGGGGAT TTCCACCCTG
GCATCGTACC GCAGCACCCA GCTCTTCGAG GCGCTCGGTC TGGATCAGAT GGTGGTGGAG
CGCTGTTTCA AGGGGACGGT CAACCGCATC GGCGGGGCGT CGTTCAGCCA TCTCGAAAAC
GACATCCGCC AGCAAGTCCG CGATGCGTAT ATGCCCCGAA AGGCGCTGCC ACTGGGCGGC
CTGCTCAAAT ATGTCAACGG CGGTGAATAT CACGCCTACC ATCCGGATGT CGTCCAGAGC
CTGCAAACGG CGGTCCGTTC AGGGCGCTAT GACGACTACC GGGTTTTTGC CGGGCTGGTG
AACGATCGCC CTGTCACCAA CCTGCGCGAT CTGCTGCAGT TGCGCCCGGC AGCACAGCCC
ATACCACTCA GCGAAGTGGA GCCCATCGAA GCGATTACCC GCCGTTTCGA CACGGCGGCC
ATGTCTTTGG GTGCCCTGTC GCCGGAAGCC CACGAGGCCC TGGCCATCGC CATGAATACC
ATAGGCGGGC GTTCCAATTC CGGCGAAGGC GGTGAGGATC CGACCCGTTA CCACAACAAT
AAAGTCAGCA AGATCAAGCA GATCGCCTCC GGTCGTTTTG GTGTGACGCC GGAGTATGCG
GTCAACGCCG AAGAGTTGCA GATCAAGGTG GCACAGGGCG CCAAGCCTGG AGAGGGCGGT
CAGTTGCCGG GGCACAAGGT CAGCGGCATC ATTGCCCGCC TGCGCTACGC CAAGGAAGGC
GTCGCCCTCA TCAGCCCGCC GCCGCACCAT GACATCTATT CCATCGAGGA TCTGGCCCAA
CTCATTTTTG ACCTGAAGCA GGTCAATCCA CAGGCCTACG TCTCCGTGAA GCTGGTCTCG
GAAGCCGGTG TCGGCACCAT CGCCGCCGGC GTGGCCAAGG CCTATGCCGA CCGTATCACC
ATCGCCGGTT ACGACGGTGG CACCGGCGCC AGTCCGCTGA GTTCGGTCAA ATATGCCGGC
TCGCCGTGGG AACTGGGGTT GGCAGAAACC CAGGTCACCC TGCGCCGCAA CCACTTGCGG
CACCGGGTGC GTTTGCAGGC CGACGGCGGC TTCAAAACCG GGCTGGACGT GATCAAAGGC
GCTCTGCTGG GTGCGGAGAG CTTCGGTTTC GGCACCGCAC CGATGATCGC GCTGGGCTGC
AAATATCTGC GCATCTGCCA TCTCAACAAC TGCGCCACTG GCATCGCCAC CCAGGATGAG
ACCCTGCGCA AACATTTCAC CGGCCTGCCG GAAATGGTCA TCAACTACTT CCGTTTCGTC
GCCGAAGAAG CCCGCGAAAT CATGGCGCAA CTCGGCATCC GTCGCTTCGA TGACCTCGTC
GGCGCCAGCC AGATGCTGGA AATCGGTGGG GCGCAGACGG AAAAACAGGC ACATCTGGAT
CTGCGTCCGC TGCTGGGCAA CACCGATCTG CACAATGCCG ACACCAACAT TCAGACCCAG
GACCGCAACC CGCCTTTCGA CAAGGGGGAT CTGGCGGAAA CCATGGTGAA GGACGCCCGA
CCCGCGCTGG AAGGGCAAAT CCCCACCCGT CTGCACTACC CGATCCGTAA CGTGAACCGC
TCCATCGGCG CCCGCCTTGC CGGAGAAATC GCCCGCCGCT ATGGGAATTC CGGGCTGCGG
GAAGATGCGG TACACGTCGA CCTGCAGGGC ACCGCGGGCC AATCCTTTGG TGCCTTCTGC
GTACAGGGGA TGACCCTGCA TCTGCATGGC GATGCCAACG ATTATGTGGG CAAAGCCATG
AATGGCGGTA CGATCATCAT CGCGCCGCCG GCTGGCGTCA CTTATGCCAG CTGGGACTCG
GCCATCGTCG GCAACACCTG CCTGTACGGA GCCACCGGGG GACGCCTCTA CGCCGCGGGA
CGCGCCGGTG AGCGCTTTGC GGTGCGCAAT TCAGGAGCCA TCGCCGTGAT CGAAGGCGCC
GGAGATCACG CCTGCGAATA TATGACCGGT GGTCAGATCG TCATCCTCGG CCCGGTCGGT
GTGAATTTCG GGGCGGGCAT GACCGGTGGC CTCGCCTTCG TCCGCGATCA GGCCCGCCAG
TTCCCTGATC AAGTGAATGG TGAACTGGTG AATTATCACG GGATCGAAAC CGAATCCATG
CGCGGCTACG AGGCCCTCCT GCGGCGCCAT ATCGAGGCTC ATGTGGCCGC CACCGGCAGC
GGTTATGCCG CGGGGCTGCT CAAGGACTGG ACCCACTTTA TCCGCGATGT CTGGCTGGTG
GTGCCCAAGG CCGCCAAACT GGATGTCCTG CTCGAAGAAG CGAGCTGA
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| Protein sequence | MTQSLYSSDF ERDSCGFGLI AQMDNQASHA IVATAIVSLA RLTHRGAIAA DGKSGDGCGL
LLQMPEAFFR AIAAEQGITL GTHFGIGQFF LPRDETVAKT IRTALGVEAE DLGLRCLGWR
EVPTDLGACG EEALQSLPGI WQAFVGLPDG MDTDNRERLL YRLRRRVEKR FADEGSFFAV
TCSSQAIGYK GMVLPENLPV FYPDLRDPRF ASALVTYHQR FSTNTWPEWR LCQPFRILAH
NGELNTVQGN RLWARAREAQ LQSDLLPMAE VLPAVGGGSD SFSLDNMLEL LVQGGMDFFK
AIRLLVPPAW HNVPRIEPAL RAFYEYHSMR MEAWDGPAGL VLNTGRIAAC ALDRNGLRPA
RYVITKDRII NISSEVGVFD YDHRDIVVQG RVGPGQLVAV DMGTGKFLES ADIDAQIQNS
HPYREWLDLY AEHLDSDDRA ATPALPVNDL LVSEKAFGVS FEEEDQVIRV LAEGAQEAVG
SMGDDTPVAV LSRQTRHIAD YFRQQFAQVT NPPIDPLREA LVMSLNTVIG SESNLFAERP
QYARRIEVHS PVLSDAIFSA LTSHTEPAFR SQTFDLCYSA ADSNLGGAIE ALCEAVIEAV
RHGAVILVLS DHALERDRLY IPALMAVGAV HHALIDAGLR TRCNIVAATA HARDPHQFAT
LIGYGATAIY PYLSYAIIRS LAERHAFSQP VTALKALENY RKGIDKGLYK ILSKMGISTL
ASYRSTQLFE ALGLDQMVVE RCFKGTVNRI GGASFSHLEN DIRQQVRDAY MPRKALPLGG
LLKYVNGGEY HAYHPDVVQS LQTAVRSGRY DDYRVFAGLV NDRPVTNLRD LLQLRPAAQP
IPLSEVEPIE AITRRFDTAA MSLGALSPEA HEALAIAMNT IGGRSNSGEG GEDPTRYHNN
KVSKIKQIAS GRFGVTPEYA VNAEELQIKV AQGAKPGEGG QLPGHKVSGI IARLRYAKEG
VALISPPPHH DIYSIEDLAQ LIFDLKQVNP QAYVSVKLVS EAGVGTIAAG VAKAYADRIT
IAGYDGGTGA SPLSSVKYAG SPWELGLAET QVTLRRNHLR HRVRLQADGG FKTGLDVIKG
ALLGAESFGF GTAPMIALGC KYLRICHLNN CATGIATQDE TLRKHFTGLP EMVINYFRFV
AEEAREIMAQ LGIRRFDDLV GASQMLEIGG AQTEKQAHLD LRPLLGNTDL HNADTNIQTQ
DRNPPFDKGD LAETMVKDAR PALEGQIPTR LHYPIRNVNR SIGARLAGEI ARRYGNSGLR
EDAVHVDLQG TAGQSFGAFC VQGMTLHLHG DANDYVGKAM NGGTIIIAPP AGVTYASWDS
AIVGNTCLYG ATGGRLYAAG RAGERFAVRN SGAIAVIEGA GDHACEYMTG GQIVILGPVG
VNFGAGMTGG LAFVRDQARQ FPDQVNGELV NYHGIETESM RGYEALLRRH IEAHVAATGS
GYAAGLLKDW THFIRDVWLV VPKAAKLDVL LEEAS
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