Gene Lferr_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0875 
Symbol 
ID6876840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp831148 
End bp832050 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID642788757 
Product1-acyl-sn-glycerol-3-phosphate acyltransferase 
Protein accessionYP_002219332 
Protein GI198283011 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.342113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTC GTAAAAAACC CGCCCCGGTA TTGGTGCCAT ATCCGGGGCG GCGCTGGCGT 
CGCTCGCGGC CCAAGGCTGT GCGGCGCATC TGGCGGCTGC CGGTGCTGGT ATTTTATCTG
CTTCTGGCCT TTCCGTTAGC GGTGTGGACC TGCGCCCGAA AGCCCGCACC GGACGCCGGT
AGCTATCGGG CTTTTGCTTG GTGGAGTCGG CAGGCCCTGC GCATTTTTGG GATTCATCTT
CGTGTGGATG GGGTCATCCC GGAAGTGCCG GTGCTGGTCG CCGCCAATCA CGTTTCCTAC
CTCGACATTC TTGCGCTGGC GACCTTGATT CCCAGCCGTT TCGTAGCGAA GAAGGAAATG
CGCGCATGGC CCTTTTTCGG GATTATGGGT GCGTGGTTGG GGACGCTTTT TATCGATCGC
AGTGATGCCC GCGCCAGCCA GCGCATCCTG CGTCAGGCGG GTGAGATTCT GGCAGCCGGT
ACCAGCGTAA CCATCTTTCC GGAGGGGACC ACGAGCGACG GCAGGGAAGT CGGCGATTTT
TTTGCAGCGC CTTTTGAGGC CGCCTGCTGG GCAGGGAGGC CCACCATACC GGTTGCACTG
CGTTATGAAG ACGTGCTCCG TCCCGGCCAG CCGGACGCAC TCTGCCCCTT TGTCGGTGAC
GACAGCCTAT TCGGCCATCT CTGGCGACTG GCGGCGGCCG CACCCCTGAC GCTGCGGCTG
GAATTCCTGC CCGCACTGGC CCCCGGATTG GGACGCCGCG AGTTGGCGAC GACTGCTCGG
CAGGCCATCA CCGAGGCCCT GCAGCGGATG GAACAGGGGG CGTCTGTCAC CTATCTGCGC
GACCCCCGCC GTCATTCCCT ACGGGGCGCC TGGGTGGCGT GGCGGCGGGG ACATGGTGGA
TGA
 
Protein sequence
MMRRKKPAPV LVPYPGRRWR RSRPKAVRRI WRLPVLVFYL LLAFPLAVWT CARKPAPDAG 
SYRAFAWWSR QALRIFGIHL RVDGVIPEVP VLVAANHVSY LDILALATLI PSRFVAKKEM
RAWPFFGIMG AWLGTLFIDR SDARASQRIL RQAGEILAAG TSVTIFPEGT TSDGREVGDF
FAAPFEAACW AGRPTIPVAL RYEDVLRPGQ PDALCPFVGD DSLFGHLWRL AAAAPLTLRL
EFLPALAPGL GRRELATTAR QAITEALQRM EQGASVTYLR DPRRHSLRGA WVAWRRGHGG