Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0821 |
Symbol | |
ID | 6876786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 780433 |
End bp | 780921 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642788703 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_002219278 |
Protein GI | 198282957 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000871851 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.998171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGA CGACAAAAGG ACGCTACGCG GTGACCGCCA TGCTGGATCT GGCACTCAAT CAGCGTGGCG GTGTGGTGAC CGTGGCCGAT ATCTCGCAGC GTCAGCAGAT TTCTGTGGCT TACCTGGAGC AGCTCTTTGG GCGGCTGCGC CGTTTTGGTC TGGTGGAAAG TGTACGCGGG CCGGGCGGCG GTTACCGACT GGCCATGCCG GACTCGGAGA TTCCGTTGAC GCGGATTGTG GAGGCCGTCA ATGAGTCCAT CAGTACGACC CAGTGTGGTG GTGACCCGCA TCTGTGTTGT AAGGGGGATG GGCAGCAGTG CCTTACTCAC GACCTGTGGG AAGAATTGGG AAATCGTATC GCCGAGTTTC TCGGGGGGAT TACCCTTGGT CAACTGGTAC AGAAGCAGTT GCACAAGGAG TTGATGCAGG CAGCTCCGAT CGCGATGACG GATAAAACAC CACTGCGCGA GACGCATGAC ACCGCTTAA
|
Protein sequence | MKLTTKGRYA VTAMLDLALN QRGGVVTVAD ISQRQQISVA YLEQLFGRLR RFGLVESVRG PGGGYRLAMP DSEIPLTRIV EAVNESISTT QCGGDPHLCC KGDGQQCLTH DLWEELGNRI AEFLGGITLG QLVQKQLHKE LMQAAPIAMT DKTPLRETHD TA
|
| |