| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0782 |
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| Symbol | |
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| ID | 6876746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 742221 |
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| End bp | 744371 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642788663 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_002219239 |
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| Protein GI | 198282918 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000788567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTAG ATTTAGCCGG GGGCTGGAAC CCCATGCTGG GGCGCCTTGC CTGGTCTCAG
ATTCCTTACG ACAACCCCAT CCTGGCGCCG CTGTTTGTCG CGGTGGTCAT TGGGGCCATC
CTGGTGCTGG GTCTGATCAC GTACTACGGG AAATGGACCT ACCTGTGGAA GGAATGGCTG
ACCACCGTGG ATCACAAAAA ACTAGGGGTG ATGTACATCC TCATCGGTTT GGTGATGCTG
TTCCGGGGTT TCATCGATGG TCTGATGATC CGGACACAGC AGGCCTGGGC GGTAGGCCCA
CATTCCTCGG GAGTGTTCGG TGCGACGCAC GGTTACCTGA CTCCGTTCCA TTTCGGGCAG
GTCTACAGTG CCCATGGGGT GATCATGATT CTGCTGGCAG CCACGCCGTT GCTCGTCGGC
TTCATGAACA TCATCGTGCC CATTCAGATC GGTGCCCGGG ACATGGCCTA CCCCTACCTG
AATGCGTTGG GGCTATGGTT CACCGCCGCG GCCGGGGCAT TGATCATGAT TTCCCTGTTC
GTGGGTGATT TCGCGCACAA TGGCTGGTTC GGTTATGCAC CGATCTTCGA GTTGCAATAC
AGCCCGGGCG TCGGTGTGGA CTACTGGATA TGGACCATGG AGTTGTTGGC GCTGGGGACC
ACCTTGGGCG GCATCAACAT TCTGGCGACC ATCATCAAGA TGCGCGCGCC GGGTATGACC
TGGGGTCGTT TGCCGATCTT TGTCTGGGCT TCGATTGCGT CGAACGTGAT TGCCCTGACT
TCTTTTCCGG CACTGCAGGT GGCACTTGCA TTGGTTGCTG CAGACCGCTA TCTGGGCGCG
CATTTCTTCA CGGCGGGTCT GGGTGGCAAT CTGATGCTCT ATACCAATCT ATTCTGGATA
TGGGGCCACC CGGAAGTCTA TTTCGTGATT CTTCCGGCCT TCGGCATGAT GTCGGAAATC
TTTCCGACCT TTTCCGAAAA ACCATTATTT GGCTACATGA CCATGGTACT CGCCAGTATG
GCCATTGCCG GCGTTTCCTG GCTGGTCTGG CTGCATCATT TCTTTACCAT GGGCGCCGGG
CCCTACGTCA ACAGCGCCTT CAGTGTGGCC ACCATGCTGG TCGGCATTCC TACGGGTGTG
AAGGTGTTCA ACTGGGCATT CACCATGTAT CGTGGGCGTC TGACTTTCAA CGCCGCCATG
CTGTGGGCCA TCGGCGCGCT TTTCCTGCTG CTGGTAGGCG GATTGACGGG CATGATGCTG
GCGGTTCCGG CCATCAATTA CATGGTCCAC AACAGCGTTT TTGTGGTCGC GCATTTCCAT
TCCATGCTGT TGACGATTGT GTACGCCATT TTTGCTTCGG TGATCTACTG GTTTCCCAAG
GTCTTCGGCT TCAAGCTGAA TGAGTTCTGG GCAAAGACCA TGTTCTGGCT CTTTTCTGCC
GGTACGGTGC TGGTGTTCGT GCCGATGTAC ATGCTCGGTT TCATGGGTAT GACCCGGCGT
CTGGATTATG TGTTCAACAC CGCTTGGCAT CCTTATCTGC TGGTGATGGA ATTCGGTATC
GTGGTGTATA CGCTTTCCGT CCTCGCATTT TTCGCGCTGC TTTATGTCAG TGTCCGCGAT
CATGCGAGCA ACCAGGTTGG CGCGGATGCC TGGGGTACCT CCCGCTCGCT GGAATGGCTT
ACCCATTCTC CTGTGCCATT TTATAACTTT GCCGTACTGC CGCACATCAA TGCGCGCGAT
GAAGTGGCCT GGCGGCGTGA TAACGGCATC GATCATGTTC AGCCCGATCA CTATGAAGAT
ATCCATATGC CCAATAATAC CGGTGTGGCC ATTGTCCTTG GCGGCCTGAC CTTTGTGCTG
GGTTTCGCCC TGGTATGGCG TATCTGGTGG CTTTGTGCCT TCTCCCTGCT GGCAATCATT
GCACTCGTAA TCTACCGCTC CTTCAAGGGT GATCCGGGTT ACATCATTAC CGCGGCGGAA
CTGGAACAGA TGGAAAAGGC AGCTATGCGC CGGGAAGCAG GGATAGGTAA ACAGCAGCAT
CGGGTCGGCG GCGGCGTATT GGGTGAGGCA ATAGCCTATG AGCGTTCTGA CCTGCCGCCA
CTGGCTTCGC AGCCGAGCTC ATCCGTGGGG CTGGATCATC ATCGCAGTTG A
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| Protein sequence | MLVDLAGGWN PMLGRLAWSQ IPYDNPILAP LFVAVVIGAI LVLGLITYYG KWTYLWKEWL
TTVDHKKLGV MYILIGLVML FRGFIDGLMI RTQQAWAVGP HSSGVFGATH GYLTPFHFGQ
VYSAHGVIMI LLAATPLLVG FMNIIVPIQI GARDMAYPYL NALGLWFTAA AGALIMISLF
VGDFAHNGWF GYAPIFELQY SPGVGVDYWI WTMELLALGT TLGGINILAT IIKMRAPGMT
WGRLPIFVWA SIASNVIALT SFPALQVALA LVAADRYLGA HFFTAGLGGN LMLYTNLFWI
WGHPEVYFVI LPAFGMMSEI FPTFSEKPLF GYMTMVLASM AIAGVSWLVW LHHFFTMGAG
PYVNSAFSVA TMLVGIPTGV KVFNWAFTMY RGRLTFNAAM LWAIGALFLL LVGGLTGMML
AVPAINYMVH NSVFVVAHFH SMLLTIVYAI FASVIYWFPK VFGFKLNEFW AKTMFWLFSA
GTVLVFVPMY MLGFMGMTRR LDYVFNTAWH PYLLVMEFGI VVYTLSVLAF FALLYVSVRD
HASNQVGADA WGTSRSLEWL THSPVPFYNF AVLPHINARD EVAWRRDNGI DHVQPDHYED
IHMPNNTGVA IVLGGLTFVL GFALVWRIWW LCAFSLLAII ALVIYRSFKG DPGYIITAAE
LEQMEKAAMR REAGIGKQQH RVGGGVLGEA IAYERSDLPP LASQPSSSVG LDHHRS
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