Gene Lferr_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0712 
Symbol 
ID6876674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp673136 
End bp674068 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID642788592 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_002219170 
Protein GI198282849 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.25723e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTCCT TCCTCCACCA CCGCAGCAAC CGCGCCGCTG ACCTGCCTCA GGCAGTCAGC 
ATCGGCAATT TCGATGGGGT GCATCGCGGC CATCAGGCAC TGCTGAAAAC CATGCAGGAT
AGCGGCCTGC CCACTGCGGT GCTCACCTTC GAGCCCCTTC CCCGGGAGTT TTTCCGAGCT
GCGGACGCGC CACCACGATT GAGCAGTTTG CGCGAGAAGG TGGTGGCACT CCGCCACAAT
GGGGTACAGA GCATCACTTG CCTGCCCTTC AATCAGGCGC TGGCCAACCT GCCCGCCGAG
GATTTCATTA CTCAGATACT GGTCAGGCAA TTGTGCTGCG GGCTGCTGAG CGTCGGCCAT
GACTTCCGCT TCGGGGCGAG ACGGCGCGGT GATCTGGACA TGCTCAGCCG CTTCGGGCGA
CAGTATGGGT TTTCGGTGAA AGAGCAGCCC CCCTTTCTGC TCGACGGCCA ACGGGTCAGC
AGCACCGGCA TCCGCGCCTT TCTGCAGAGC GGCGACCTGA CCCATGCGGC GTCCTGGCTG
GGACGTCCCT ATGCCCTCTG TGGGCGGGTC GTGCATGGCG ACCATCTAGG TCGGGAACTG
GGCTTCCCGA CCGCCAACAT CCCTCTGAAT CGTCGCCCGG TGCCCGTCAA AGGTATCTTT
GCCGGACGCC TGTTGAGTCC GAAAGGAAAC TGGATCGCCG CCGTCAGTAT CGGTCTGCGC
CCCACCGTCG GCGGCAAACA GATGGTACTG GAGGCCCACT GTCTGGATGC GGACAGCCCC
GACCTCTACG GACAGCAGGT TTCCGTGGAG CTGCACCACA AGCTGCGGGA CGAAGAGAAA
TATATGGATC TCGATACCCT CAAGGCGGCC ATCGACAACG ATGTCGTGAA CACCCGGAAC
TTTTTCGCCG AACATCCCCA GGACTTTGAA TAA
 
Protein sequence
MHSFLHHRSN RAADLPQAVS IGNFDGVHRG HQALLKTMQD SGLPTAVLTF EPLPREFFRA 
ADAPPRLSSL REKVVALRHN GVQSITCLPF NQALANLPAE DFITQILVRQ LCCGLLSVGH
DFRFGARRRG DLDMLSRFGR QYGFSVKEQP PFLLDGQRVS STGIRAFLQS GDLTHAASWL
GRPYALCGRV VHGDHLGREL GFPTANIPLN RRPVPVKGIF AGRLLSPKGN WIAAVSIGLR
PTVGGKQMVL EAHCLDADSP DLYGQQVSVE LHHKLRDEEK YMDLDTLKAA IDNDVVNTRN
FFAEHPQDFE