| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0701 |
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| Symbol | |
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| ID | 6876663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 656182 |
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| End bp | 658032 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788581 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_002219159 |
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| Protein GI | 198282838 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0529075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000140832 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAGGA ACGACGTGGG TATGAGAGCC GGAAACGGGA GAAGGGCCGG TTGGGCCATG
GGTGTCCAGT TGTGGAGCGG AATTTGCGGT GTCCTGCTAT TGTCCTGGCT GTCTCTCGGC
TGTGCCGGTA CGTTTCTGAC CCCGGATCAG GCATTTCATT TTGAAGCGCG GCTGAGTGGC
CGGCACCAGT TGCAACTGCA CTGGGATGTG GCGCAGGGAT ACCACCTGTA CCGCGATCGG
ATCAAGTTCT CCGTGACGCC GAGCAATGTG CTGCTAGGGC ATTATACATT GCCCGCAGGA
GTGGAGCTGA ACGACCCGGT TTTCGGCAAG ACACGGGTAT TGGAAGGGAA AAATACCCTC
ACCGTACCTT TTACCGTCCA GGGAACCGCC CCTGCTTTCA TTGAACTGAA ATCTACCTAT
CAGGGCTGTG CCAATGCGGG TGTTTGCTAC CCGGAGCAGG TCAAGACGAT CAAGCTGGCC
TTGACCCAGC AGGCCGTGCC GCCCCCGGCG GCGGTGCCGG TCGTGCCCCC GCCGGGGACG
GCGGTCCCGG CTGCTGCGGT CAGCCCCGTG AATGATGCCG GGGCGCTGGC AGGGGCTTTG
CGTGACAGCT TCTGGCTCAC CTTGGGTCTC TTTTTTATCT CTGGACTGGG TCTGGCCTTT
ACGCCCTGTA TTTTTCCCAT GATTCCTATC CTCTCCGCCC TGATCGTCGG TAAGGAGGCA
GGGCGCGGCC CGCAACGGTC ACGCGCCCTG GGGCTTTCCG TCGCCTATGT GCTGGGAATG
TCGCTGACCT ACAGTATTGC CGGGGTGCTG GCGGCGGTGA GCGGCGCCTA TATGCAGGCG
GCCTTCCAGA GTCCCTGGGT GCTGGGGGCT TTTGCCTTTG TTTTTGTGCT GCTGGCGCTG
TCCATGTTCG ATTTTTACGA GCTGCAAATG CCGAGTGGCA TTCAGACACG TCTGGCCGGC
ATGGGACGGG GCGGGCACCT GTTCAGTACC TTTGTCATGG GGGTACTGTC AGCGCTGATC
ATCGGGCCCT GCGTGGCCGC CCCCCTGGCA GGCGGGCTGC TCTTCATTTC CCAGACGGGA
GATGTTTTTC TTGGTGGATT GTCACTGTTC GCTCTGAGCC TGGGGATGGG CGTGCCCCTG
CTGATCATCG GTACTTCCGC CGGGCATTTT CTACCGCGGG TTGGTGCCTG GATGAATGCC
GTTAAGGCGG TTTTCGGTGT AGTGCTGCTG GGCGTCGCCA TCTGGTTGCT GACACGAGTT
CTGCCGGGGC CCGTCAGCTT GGCCCTATGG GCAGCGCTGG CAGTCATCAG TGCCATCTAT
CTCGGGGCGT TGGACGCAAT CCCGGCGGGT GCTTCGGGCT GGCGCCGTTT CTGGAAAGGC
CTCGGAGTGC TCATGCTGGT GTACGGCCTG GTCATGGGTG TGGGGGCGCT GGGCGGCGCC
AGCGATCCCC TGCAACCCCT GACAGGCTAT ACGGCGGCGG TGCCGCCCGA AAACCGGGCC
GAGGCCCTGC ATTTTACTAC CGTGAAAACC CCCGAGGCCC TGCAGAGCGC ACTGGTACAG
GCCAGGGGCA GACCGGTGCT GGTGGATTAC TGGGCAAGCT GGTGCGTGGA ATGCCTGCGC
ATGGATAAAG TCACGTTTGC CGATCCGCAG GTGGTGGCCG CCCTACGAAA GCGGCTGCTG
ATCCGCGTGG ATGTGACTCA GGATGATGCG GCCAGTCGCG CCCTCCTGAA GCGTTACAAC
CTGGTGGGCC CCCCGGCTTT CATCGCTGTA GCCGCAGATG GCAGGACGAC GGCGCAGCAG
GAGGGATATC TGGGGCCGGA GGCGTTTATG GGGTGGTTGC ACCAATCCTA G
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| Protein sequence | MARNDVGMRA GNGRRAGWAM GVQLWSGICG VLLLSWLSLG CAGTFLTPDQ AFHFEARLSG
RHQLQLHWDV AQGYHLYRDR IKFSVTPSNV LLGHYTLPAG VELNDPVFGK TRVLEGKNTL
TVPFTVQGTA PAFIELKSTY QGCANAGVCY PEQVKTIKLA LTQQAVPPPA AVPVVPPPGT
AVPAAAVSPV NDAGALAGAL RDSFWLTLGL FFISGLGLAF TPCIFPMIPI LSALIVGKEA
GRGPQRSRAL GLSVAYVLGM SLTYSIAGVL AAVSGAYMQA AFQSPWVLGA FAFVFVLLAL
SMFDFYELQM PSGIQTRLAG MGRGGHLFST FVMGVLSALI IGPCVAAPLA GGLLFISQTG
DVFLGGLSLF ALSLGMGVPL LIIGTSAGHF LPRVGAWMNA VKAVFGVVLL GVAIWLLTRV
LPGPVSLALW AALAVISAIY LGALDAIPAG ASGWRRFWKG LGVLMLVYGL VMGVGALGGA
SDPLQPLTGY TAAVPPENRA EALHFTTVKT PEALQSALVQ ARGRPVLVDY WASWCVECLR
MDKVTFADPQ VVAALRKRLL IRVDVTQDDA ASRALLKRYN LVGPPAFIAV AADGRTTAQQ
EGYLGPEAFM GWLHQS
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