Gene Lferr_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0700 
Symbol 
ID6876662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp655038 
End bp655868 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID642788580 
Producthypothetical protein 
Protein accessionYP_002219158 
Protein GI198282837 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.40392e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.02529e-10 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCTTT TCTCCTTTGT GGTTTTAGGG CGACTCCGGG TTGCCCTTTT TTACATGGAG 
CAGCCTGTGT CCCCGTCGGC CGAAAGAGCT TTTACTCTGG TTCACCCCAA TGGCGACCGC
GTCTGCGGAC TCATTCACGA AAACCATACC GACCCCGTCG GTATCTTCCT CCCTGGCTTC
GCCTCCAATA TGGAAGGCAC CAAATCGCAG ATCCTCGCCC GCAACGCGCA GGCGCAAGGT
TGGTCCTGGG TACGCTTTGA TCCACGTGGC GTCGGGCGCT CCGATGGACC ATTCCAGGCG
CTGACCCTGT CCCGGTATCT GGCCGACCTC CGGTTGATTC TACATCATAT GCTGCAGGAT
CGCCCGGTGC TGCTGGTGGG TTCCAGCATG GGCGGATGGC TGGGCACCAT CGCCGCCACC
CGATGGCCGG AACAGATCCG CGCCCTGCTG CTCATTGCCC CCGCTTACAA CTTCATTCAG
GAAATTTTCC GGCGTTTGCC CGCTGCCGAA AGGCAAGCCT GGGAGGACAG CAATCTGCGC
TGCTGGGAGG ATCCTTACGG ACTCGGTGAG TTACACATGC GCTTCGACCT GGTCGCCGAC
AGTTGGCGCT ACGACCTGCT GCGCTTTCCG CCGTACCTGC ACTGTCCGGT GGAGATTCTG
CACGGCAGCG CCGATGAGGC CGTACCTCTC GCCCTCAGCT ATCGGTTCGC CGCCCGCGCC
CATGCGCCAG AACTGGCCAT CCGTCCCTTA CCAGGCGTCG ATCATCGCCT ACGAGGTGCC
GATGCCACGC TCCTGCGCAG CCTGCAATCC CTCTGGACCC GCATCTCCTG A
 
Protein sequence
MFLFSFVVLG RLRVALFYME QPVSPSAERA FTLVHPNGDR VCGLIHENHT DPVGIFLPGF 
ASNMEGTKSQ ILARNAQAQG WSWVRFDPRG VGRSDGPFQA LTLSRYLADL RLILHHMLQD
RPVLLVGSSM GGWLGTIAAT RWPEQIRALL LIAPAYNFIQ EIFRRLPAAE RQAWEDSNLR
CWEDPYGLGE LHMRFDLVAD SWRYDLLRFP PYLHCPVEIL HGSADEAVPL ALSYRFAARA
HAPELAIRPL PGVDHRLRGA DATLLRSLQS LWTRIS