Gene Lferr_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0686 
Symbol 
ID6876648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp640751 
End bp641200 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID642788566 
Producthypothetical protein 
Protein accessionYP_002219144 
Protein GI198282823 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.36633e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.90362e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACAG TGACTTGGGT ACTGGTGAGT AACGCCGCAG AGGCGCGCCT CTTTAAAAAT 
GAGGGCTGCA ATACCGGGCT GCATCTGGTA CAGGATTGGC AGCATCCCGA CAGCCGCAAG
CACCAGGACG AACTGGTGAC GGATGCGGGA GGGCGCGTTC AGCAGAGCTT CGCTGCGGGA
GCACGGCCTG GTATCGAATG GCAAACCAGT CCTAAGGAGG CGGAAATGCT GCAATTCGCC
AATGAGCTGG CGACCTATTT GGGCACGGCG CGAAAGCAGA ATGCTTTCCA ACACCTGGTG
CTCGTCGCTT CTCCGCATAT TCTGGGTTTG CTGCGCGAAA AACTGGATGC ACCTACCAGC
GCAATGATTT CCGGCACTTT GAGCAAGGAT TATACCTATG TCGGTATCGA GGAGCTCCGT
AAGCATCTCG CCGAGGTCAT GTGTCCATGA
 
Protein sequence
MATVTWVLVS NAAEARLFKN EGCNTGLHLV QDWQHPDSRK HQDELVTDAG GRVQQSFAAG 
ARPGIEWQTS PKEAEMLQFA NELATYLGTA RKQNAFQHLV LVASPHILGL LREKLDAPTS
AMISGTLSKD YTYVGIEELR KHLAEVMCP