Gene Lferr_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0681 
Symbol 
ID6876643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp632840 
End bp633451 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content60% 
IMG OID642788561 
ProductDJ-1 family protein 
Protein accessionYP_002219139 
Protein GI198282818 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.728078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0428535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCTG CGATACAGGT GCTGATCGCC GTAGCGGATG GTTTTGAGGA CATGGAGGTA 
GTGATCTCCT GCGATATTCT GCGGCGGGCG GGTTTGCAAG TGGTCCTTGC CGGACTGGAA
AACGGCTTGG TCACCGGTGG ACGGGGACTG CGCCTGCAAC CAGACGCGTT GTTCGCCGAT
GTGGCCGACG CTGATATCGA TGTGATTCTG CTTCCCGGCG GGATCGGGGG TGTAGAGCGC
ATGGCAAAGC ATCAGCCGCT CATCGGGCTC CTGCAGGAAC GAACCCGGCA GGGGCAGATC
ATAGCCGCCA TCTGTGCCGC ACCTGGCATG CTGGCAGCCC ATCACCTGCT CGATGGCCGT
CAGGTCACCG CTTATCCCGG CACCCTCGAT CCGCAGAGCC GGGATTATAC CTACCAGGAA
AATGCCGTAG TGGTCGACGG TCCCCTGATC ACATCCCGCG GACCGGGTAC AGCCATGGAT
TTTGCCCTTA CCCTGGTGGA ACTCCTCCTC GGCCCTGAAA AACGTCAGGA AACGGAGGCA
CCACTGCATC GTAGCACCCC TGAGACTTCC CCTTTGTCCG CCACTATGGA TAATAGGGCC
AGCATCACTT AA
 
Protein sequence
MTSAIQVLIA VADGFEDMEV VISCDILRRA GLQVVLAGLE NGLVTGGRGL RLQPDALFAD 
VADADIDVIL LPGGIGGVER MAKHQPLIGL LQERTRQGQI IAAICAAPGM LAAHHLLDGR
QVTAYPGTLD PQSRDYTYQE NAVVVDGPLI TSRGPGTAMD FALTLVELLL GPEKRQETEA
PLHRSTPETS PLSATMDNRA SIT