| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0559 |
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| Symbol | |
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| ID | 6876521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 523174 |
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| End bp | 525252 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788442 |
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| Product | Polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_002219020 |
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| Protein GI | 198282699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.745175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCATGA TCCGGAAAGA AGTAGATTTT GGCGGCCGCC GCCTGCAACT GGAGACGGGC
CGCATGGCGC GTCAGGCGGA CGGTGCGGTG CTGGTCTCCA GCGGAGACAC GGTCGTTCTG
GTGACGGCAG TGGGCCGCCG GGAGATGAAG CCGGGCCAGG ATTTCTTTCC GCTGACGGTC
AATTATCAGG AGAAGGCCTA CGCGGCGGGC AAAATTCCCG GTGGTTTCTT CAAGCGTGAA
GGGCGGCCCA CGGAAAAGGA GACGCTGACG TCACGCCTGA TCGATCGTCC TATCCGGCCG
CTTTTCCCCA AGGGCTTCAT GAACGAAGTG CAGGTCATCG CTACGGTGGT GTCGGTGGAT
CGGGATAACG ATCCCGATAT TCTGGCACTG GTGGGTGCCT CGGCGGCGCT GGCGGTTTCC
GGTATTCCGT TCAATGGCCC GATTGGCGCG GCCCGGGTGG CTTACATCGA CGGGAAATAT
GTGCTGAATC CCAGTTACGC GCAACTGACC ACTTCGCAAC TGGATCTCGT GGTGGCGGGA
ACCCGGCAGG CCGTACTCAT GGTCGAGTCC GAGGCGCAGC AGTTGTCCGA AGAGATCATG
CTGGAAGCGG TGATGTTCGG TCACGCGCAG TTCCAGCCCG TCATCGAAAC CATCGAAGCG
CTGGCGCGGG AGGCCGGCAA ACCGCGCTGG GAGTGGGTGG CGCCGGTGGC CGATGAAGCA
CTGGGTGTGC AGGTGCGCGA GAAAGCCACA CCGCTTCTGC AGGAGGCCTA TGCGCTGACG
GAGAAGCAGG CGCGCAGCAA GCGGCTGGAA GATGTGCAGC AGGCCATGGC GGTCGAGTTT
GGCAGTGACG ATGCGGGACG CGGAGACATG GTTCGCGGAC TGTTGAAAAA AATTGAAACC
GGCATCGTGC GAGGACGTAT TCTGGATGGC GCGCCCCGCA TCGATGGCCG GGACAGCAAG
ACGGTGCGGC CCATCACCAT CGAGGCGGGT GTGTTGCCGC GGACCCATGG TTCGGCGCTC
TTCACCCGGG GGGAAACCCA GGCCTTGGTG GTGGCGACTT TGGGTACCAA GGGCGACGAG
CAGATCATCG ACGCCCTGCA GGGCGAAAGC CGTGACCGCT TTATGCTGCA TTACAACTTC
CCGCCCTTCT CTACCGGTGA AACGGGTATG GTGGGTTCGC CCAAGCGCCG GGAGATCGGG
CACGGGCGCC TGGCGAAGCG GGCGATAGCG GCGGTCCTGC CGACCGACAG CGAATTCCCG
TACAGCTTAC GGGTTGTTTC TGAGGTACTG GAGTCCAACG GCTCTTCCAG TATGGCGACG
GTCTGTGGCG CCTCCTTGGC GCTGATGGAC GCGGGCGTAC CCCTCAAGGC GCCGGTGGCG
GGCGTGGCCA TGGGCCTCAT CAAGGAAGGA GCGCGTTTTG CCGTCCTCAC CGATATCCTG
GGCGATGAAG ATCATCTGGG CGATATGGAT TTCAAGGTGG CGGGCACGGA ACAAGGGGTG
ACCGCCCTGC AGATGGATAT CAAGATCGAC GGGATTACCC GGGAAATCAT GGCGCAGGCG
CTCCAGCAGG CGCTGGCGGG ACGACTGCAT ATCCTCGGCC TGATGAATGG CGTGCTGTCC
AGGGGCCGTG GCGAGTTGTC CGACTACGCA CCGCGCATCA TCACCATCCA GATCAATCCG
GATCGCATCC GCGACGTCAT CGGGCCGGGC GGTAAAGTCA TCCGCGCCCT GACCGAAGAA
ACCGGCGCGA CCATCGATAT CCAGGACAAC GGCACGGTAA CCATCGCCTC GGTGGACGGT
GAAGCCGGCG CCGCCGCGAA GCGACGTATC GAGTTGCTGA CGGCGGATGT GCAAGTCGAT
ACCATTTACG ACGGAAAAGT GGCCAAGATC ATGGATTTCG GCGCCTTTGT GACGATTCTG
CCGGGGCGCG ACGGTCTGCT GCACATTTCC CAGATCAGCA ACGAACGGGT CAGCGATGTC
CACGACCATC TCAAGGAAGG ACAGGCGGTG CGTGTCAAGG TTCTGGAAGT GGATCGCCAG
GGCAAGATCA AGCTGAGCAT GAAGGACATC CCGCAATAA
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| Protein sequence | MTMIRKEVDF GGRRLQLETG RMARQADGAV LVSSGDTVVL VTAVGRREMK PGQDFFPLTV
NYQEKAYAAG KIPGGFFKRE GRPTEKETLT SRLIDRPIRP LFPKGFMNEV QVIATVVSVD
RDNDPDILAL VGASAALAVS GIPFNGPIGA ARVAYIDGKY VLNPSYAQLT TSQLDLVVAG
TRQAVLMVES EAQQLSEEIM LEAVMFGHAQ FQPVIETIEA LAREAGKPRW EWVAPVADEA
LGVQVREKAT PLLQEAYALT EKQARSKRLE DVQQAMAVEF GSDDAGRGDM VRGLLKKIET
GIVRGRILDG APRIDGRDSK TVRPITIEAG VLPRTHGSAL FTRGETQALV VATLGTKGDE
QIIDALQGES RDRFMLHYNF PPFSTGETGM VGSPKRREIG HGRLAKRAIA AVLPTDSEFP
YSLRVVSEVL ESNGSSSMAT VCGASLALMD AGVPLKAPVA GVAMGLIKEG ARFAVLTDIL
GDEDHLGDMD FKVAGTEQGV TALQMDIKID GITREIMAQA LQQALAGRLH ILGLMNGVLS
RGRGELSDYA PRIITIQINP DRIRDVIGPG GKVIRALTEE TGATIDIQDN GTVTIASVDG
EAGAAAKRRI ELLTADVQVD TIYDGKVAKI MDFGAFVTIL PGRDGLLHIS QISNERVSDV
HDHLKEGQAV RVKVLEVDRQ GKIKLSMKDI PQ
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