Gene Lferr_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0552 
Symbol 
ID6876508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp510314 
End bp511357 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content58% 
IMG OID642788429 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002219013 
Protein GI198282692 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000599381 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00134587 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCTC TTCTTATCCC AAGTCTCCTT GCCGGTTGTG CGATCCTGTT TTCCAGCACT 
GCCCTTGCCG CAGAGTTTTC CCTGCCCGCA CCCGGCAGCA ACATGGTCGG CCAGCTTCAG
GTGGTCATCG CCAGGCATCA GGATACCCTG CTCGATATCG CCCGCCACTA TGATGTCGGC
TATAACGAAA TCCGTGCGGC CAATCCCGGT GTGGATCCCT GGCTTCCCGG GGCGGGAACC
CGGGTGCTGG TGCCCACCCA GTATATTCTT CCCCCCAAGC CCTGGACGGG GATCATCATC
AATGTCCCGG AGCGACGCCT GTTTTATTTC CCCCCGGGTC AGAACGTGGT TTACACCTAT
CCGGTAGGCA TTTTCCGCCC AAAATGGCCG AATCCGCTGG GTAGTACCCG CATCATTGCC
AAAGTTAAAA ACCCCACCTG GACAGTGCCC AAAAATATAC AGGAGGAGCA CGCCAAAGTG
GGAGAACCCA TACCTGCGTT CTTCCCCGCC GGTCCTGACA ACCCCATGGG TGAACTGGCC
CTGGAAACGG GCTGGTCGCA GATTTTCATT CACGGCACCA ATAAACCCTG GGGTGTCGGC
ATGCGGGTGA GTCATGGCTG CTTCCACGTC TATCCCGAAA ACGAGGTCCA GCTCTTCAAA
ATGGTCAAGG TGGGTACACC GGTGACGACC ATCGACCAGC CCTACGTTGT CGGGACAAAC
GGCAACGGCC AGCTCTATCT GCAAAGCTTC AAGCCGGTTG AAGCCTATGC CAAGGGCGGC
AACGCCCAGC AGCGTGCGGT AGACGCCATC AGTCACTTTG AAAAACAGAC CGGGCAAAAC
TGGACGATCA ACTGGCAACA GGTCATCGAT CTGGTGGCAA AGCCCAACAC CGTACCCACA
GGTATCAACA TCAATGCCCC AGCTCTGTCC GCGGTGGTCG CCAGTTTGCC GGCCCAACCC
TATGACTTTG CTCCCTATGG TGACGATGCC AATACGGCGA CCCCGCCGCC TCCGCCAGCC
CCCCTCTCCA GCTCCGCATC CTGA
 
Protein sequence
MKSLLIPSLL AGCAILFSST ALAAEFSLPA PGSNMVGQLQ VVIARHQDTL LDIARHYDVG 
YNEIRAANPG VDPWLPGAGT RVLVPTQYIL PPKPWTGIII NVPERRLFYF PPGQNVVYTY
PVGIFRPKWP NPLGSTRIIA KVKNPTWTVP KNIQEEHAKV GEPIPAFFPA GPDNPMGELA
LETGWSQIFI HGTNKPWGVG MRVSHGCFHV YPENEVQLFK MVKVGTPVTT IDQPYVVGTN
GNGQLYLQSF KPVEAYAKGG NAQQRAVDAI SHFEKQTGQN WTINWQQVID LVAKPNTVPT
GININAPALS AVVASLPAQP YDFAPYGDDA NTATPPPPPA PLSSSAS