Gene Lferr_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0538 
Symbol 
ID6876494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp493978 
End bp495096 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID642788415 
Productphosphoserine phosphatase SerB 
Protein accessionYP_002218999 
Protein GI198282678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.17789e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.04475e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAGTA CCCGCCTTGC CATTCTCAGC CCCGCCGCCC GCGGGCCCAT GAGTCTGCCG 
GCCAGTATGG GCCAACTGGT GGCGGAAGTG GAAAGTCACC AGGAGGTATG GGGTTGCTGG
CTGCAAAGCT GGGATATGCC CGTCACCGTC GGTGAAATCG CCCCTTTCCT CGACGAACTC
TCGCGCCAGG CCCTGCACCA GGAGCGGGAG GTGATCTGGG CTCCCATGAG CAGCGCCGAG
AGCGCTGTAC GTCTGGTGCT GCATGGAGCG GCGCGGCCCG AGGCGCTGCG CCGCGCACTG
ACCACCCTTC ACCTGCAAAA TCTTATGCCG GGCCGCGTAC TCCACTGCCA GGGCGACGAT
CTGGCCCTGA TCCTACACGG TTCCCGCGGC CCTCTGAGCG CCGTGAATCA CCGCCTCATC
GAAGCCCTGG AGGGGATCAC GCTGGATGTT GCTGTTTCCC CACTGTGGGA CAAGGGGCAT
TTCCGCCTGC TGCTGACCGA TATGGATTCT ACGCTGATCA GCATCGAGTG CATTGATGAA
TTGGCCGAAC ACCTCGGTCT CAGACGGCAG GTCGCCGCCA TCACCGAACG CTCCATGGCG
GGCGAGCTGG ATTTCCAGAC CTCCCTGCGC GAACGGGTGC GCCTGCTGGC CGGCACTCCG
GCAAGCAGTA TCGACACCAT CATCCGCGAA CGACTGCAGC TCAGTCCCGG CGCCCGGGAA
CTGGTAGCCG CGGCCAAGTC CCAGGGCGTC GAGGTCGGTG TCGTATCCGG AGGCTTCACC
CAGTTTACCC GCCACCTGCA GGAAGCACTG GACCTCGACT ACGCCTTCGC CAACACCCTG
GAAATCATCC ATGGGCAAAT CACCGGCCAG GTTCTCGGAG ATATCGTCGA TGCGACCGCC
AAAGCCGACA TCCTCGACCT GCTGGCCATC GGCCTGGGCA CCGACGCCGG TCATTGCATC
GCCATCGGCG ACGGTGCCAA CGATCTGCCC ATGATCCGCA AAGCCGGCAT AGGCATTGCC
TACCACGCCA AAGCGGTCGT CCGCGCCCAG GCGGATTTTC AGATTCGCTA CGGCGGTCTC
GATACCGCCG CCGCCTATCT CGGCTGGAGC ACCGCCTGA
 
Protein sequence
MSSTRLAILS PAARGPMSLP ASMGQLVAEV ESHQEVWGCW LQSWDMPVTV GEIAPFLDEL 
SRQALHQERE VIWAPMSSAE SAVRLVLHGA ARPEALRRAL TTLHLQNLMP GRVLHCQGDD
LALILHGSRG PLSAVNHRLI EALEGITLDV AVSPLWDKGH FRLLLTDMDS TLISIECIDE
LAEHLGLRRQ VAAITERSMA GELDFQTSLR ERVRLLAGTP ASSIDTIIRE RLQLSPGARE
LVAAAKSQGV EVGVVSGGFT QFTRHLQEAL DLDYAFANTL EIIHGQITGQ VLGDIVDATA
KADILDLLAI GLGTDAGHCI AIGDGANDLP MIRKAGIGIA YHAKAVVRAQ ADFQIRYGGL
DTAAAYLGWS TA