Gene Lferr_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0537 
Symbol 
ID6876493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp493099 
End bp493842 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID642788414 
Productglutaredoxin-family domain protein 
Protein accessionYP_002218998 
Protein GI198282677 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin
[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02190] Glutaredoxin-family domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.48652e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.01239e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAACTGA CCAGCATAGA AGGCCAAGGT GTTCCCCAGG CCGTGTTCCG CACCCGCGAT 
GATAATCAGT GGCGTGACGT CAGCACCGAC GAACTTTTCC AGGGCAAGAC CGTGATCGTG
TTCTCCCTGC CCGGCGCCTA TACCCCCACT TGTTCCTCCA GCCATCTGCC GCGCTACAAT
GAACTTGCGC CGACCTTTCG CGAAAATGGC GTAGATGACA TCCTTTGCAT GTCCGTGAAT
GACGCCTTTG TCATGGACGC CTGGGCCAAG GAACTGGCTG TCGAAAACAT CCACCTGATT
CCCGATGGCA ATGGCGAATT CACGGAAGGC ATGGGCATGC TGGTGGACAA GAGCGAACTT
GGGTTCGGCA AGCGTTCCTG GCGTTACTCC ATGCTGGTGA AGAACGGCAT CATCGAGAAA
ATGTTCATCG AACCCGACAA ACCCGGCGAT CCCTTCGAGG TCTCTGACGC CGATACCATG
CTCCACTATA TCAACCCGGA GGCACGCGAT CCCGAATTCG TCACCATCTT TACCCGCGAA
GGCTGCCCAC ATTGTGCCCG CGCCAAAGCA ATGTTGAAGG AGCACGGCAT AGCCTTTGAA
GAGATCAAGA CAGGTATGGG TACCGGCGTC AGTTCACGGA CAATTCGCGC GGTGAGCGGA
CGTTCGACCG TGCCGCAGAT CTTTATCGGC GGCAGACACA TCGGCGGCGC AGACGACCTG
GAGAAATATT TCCACGGGAA ATAA
 
Protein sequence
MKLTSIEGQG VPQAVFRTRD DNQWRDVSTD ELFQGKTVIV FSLPGAYTPT CSSSHLPRYN 
ELAPTFRENG VDDILCMSVN DAFVMDAWAK ELAVENIHLI PDGNGEFTEG MGMLVDKSEL
GFGKRSWRYS MLVKNGIIEK MFIEPDKPGD PFEVSDADTM LHYINPEARD PEFVTIFTRE
GCPHCARAKA MLKEHGIAFE EIKTGMGTGV SSRTIRAVSG RSTVPQIFIG GRHIGGADDL
EKYFHGK