| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0533 |
|---|
| Symbol | |
|---|
| ID | 6876489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 489892 |
|---|
| End bp | 490269 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642788410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218994 |
|---|
| Protein GI | 198282673 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2044] Predicted peroxiredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.140333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000215386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA AGTTGCTGAT GGTTATGGTG AACACCGATC CTTCCAACCC CCAGGAGTTG
GGTGCGCCCT TTTTTCAGGC GACGGTGGCT GCCGCGATGG ATTTTGAGGT CGAAGTTGTA
CTGACCGCCC GCGCCGGCGA GCTGGCCAAG AAGGGTGTAG CAGAGAAAAT GTTTGTTATG
CCGGGCAGCC CCAAGAGTGT CTACGACTTT ATCAAGGACG CCCATGAGGC AGGCGTGAAG
TTCTTTGTCT GCACCCCGAC CCTTGAGTTG TGGGAATGCA CCAAGGAAGA CCTGATTCCC
GAAATCCAGG ATATCGTCGG TGGCGCTTAT GTCATCGAGC AGGCAATGGA TGACGACGTG
GTCACCTTTA CCTACTAG
|
|---|
| Protein sequence | MADKLLMVMV NTDPSNPQEL GAPFFQATVA AAMDFEVEVV LTARAGELAK KGVAEKMFVM
PGSPKSVYDF IKDAHEAGVK FFVCTPTLEL WECTKEDLIP EIQDIVGGAY VIEQAMDDDV
VTFTY
|
|---|
| |