| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0524 |
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| Symbol | |
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| ID | 6876480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 483769 |
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| End bp | 484788 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788401 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002218985 |
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| Protein GI | 198282664 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.873664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000028913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAGG TTGGAGAGCT GTTGCGCCCG CAGGGCGTTG ACGTGGAAGT GATTTCAGCA
CGCCGTGCGC GTCTGGCCCT TGGGCCCTTG GAGCGTGGTT TTGGCCACAC TCTGGGTAGT
GGGTTGCGCC GGGTGTTGTT GTCGTCTCTC AAAGGTGCGG CGGTTACCGA GGTGGAGATT
GAAGGGGTGT TGCACGAGTA CTCCAGCATC GAGGGCGTGC AGGAAGACGT GGTGGATATC
CTGCTCAACT TGAAGATGCT GGCGGTACGG GCGCACGGAC GCGGAGATGC GGTGGTGACA
CTGCGCAAGC GTGGCCCCGG CCAAATGACC GGCGCCGATA TCGTATCGGA ACATGGTATC
GAAGTGGCGA ATCCGGAGCA GGTAATCGCC ACGCTGACCC GCGATGTGGA ACTGGTACTC
CGTTTGCGTA TTGACGAAGG ACGCGGCTAC GACGCGGCGG CTACGCGACG CCAGTCCCAT
GAAAAGCGTA TCGGTGTGAT GGCTCTGGAT GCGAGTTTTA GTCCGGTGCT GCGGGTGAGC
TATCTGGTGG AAAACGCCCG GGTAGAGCAA CGTACCGACC TGGATCGTCT AATACTGGAT
GTCGAAACCA ATGGTGTGGT GGATCCGGTC TGGGCGGTGC AGGAGGCAGC CCGCATTTTT
CGCAGCCAGC TCGGCGTGCT GGCAGGTGCG GAAACCCGGG AAATACCCGA GGCGTCGCAG
GTGCAGGTCA GTCAGAGCCT TACGCCCCTG TTGATTCGTC CGGTCGATGA TCTGGAACTC
ACGGTGCGGT CGGCGAACTG CTTGAAGGCC GAAGACATTT TTTATATCGG CGATCTGGTG
CAGAAATCGG AGCAGGAACT TTTAAAGGCG CCTAATCTGG GACGCAAGTC GCTCAATGAG
ATAAAGGAAG TTTTGGTGGC GCATGGCCTG ACGTTGGGGA TGCGACTCGA CAGCTGGCCG
CCGGAAAACC TGCCGCCGGT GCCCGGGCGG GCGGCCGATA CGGACTCGAT CATCGGCTAA
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| Protein sequence | MTEVGELLRP QGVDVEVISA RRARLALGPL ERGFGHTLGS GLRRVLLSSL KGAAVTEVEI
EGVLHEYSSI EGVQEDVVDI LLNLKMLAVR AHGRGDAVVT LRKRGPGQMT GADIVSEHGI
EVANPEQVIA TLTRDVELVL RLRIDEGRGY DAAATRRQSH EKRIGVMALD ASFSPVLRVS
YLVENARVEQ RTDLDRLILD VETNGVVDPV WAVQEAARIF RSQLGVLAGA ETREIPEASQ
VQVSQSLTPL LIRPVDDLEL TVRSANCLKA EDIFYIGDLV QKSEQELLKA PNLGRKSLNE
IKEVLVAHGL TLGMRLDSWP PENLPPVPGR AADTDSIIG
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