Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0517 |
Symbol | |
ID | 6876473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 479935 |
End bp | 481266 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642788394 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_002218978 |
Protein GI | 198282657 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.120445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000266535 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGGGT TACGTAGCAT TGGAGGTGCC GCACAGGGTG CCGGTAAGAT CAATGAGTTA CGTAACCGTA TCCTGTTTTT GCTTGGCGCG CTTCTGGTTT TTCGGGTGGG GGCGCATATC CCCGTTCCCG GTATCGACCC TGCGGCTATG GCGACGTTTT TTAATCAGCA ACGGGGAACC ATTCTTGGCA TGTTCAACAT GTTCTCCGGC GGGGCACTTT CCCGGCTGAC GGTTTTTGCG TTAGGGATCA TGCCGTATAT CAGCGCATCC ATTATTTTTC AGTTGGCCGG GTCAGTTTTT CCGAAACTTG AGGAACTAAA AAAGGAAGGC GAGGCCGGGC GTCGGAAAAT AACAGAGTAT ACGCGTTATG CGACGGTCAT ATTGGCGTTG ATGCAAGGTC TGGGAATCGC CATCGCGATT GAGAAGATGC ATGCCGGCAC TGTTCCGGTT GTTATTAGCC CAGGCCCGTT ATTCTTGTTT ACCACAACCA TTTCTTTGGC TTGTGGTACG GTTTTTTTGA TGTGGATCGG GGAGCAGATC ACCGAGCGTG GGATCGGCAA CGGCATTTCC ATGATTATCT TCGCCGGAAT TGTTGCCGGA CTGCCAGACG CAATAGGGAC GACCTTTGAA CTGATGAAAA CGGGTCAGTT TCAGCCACTA TTTGTTGTGG CGCTCTTTGT GCTGGCGCTT GCGGTGACGG GATTCGTGGT GTTTATGGAA AGTGCGCAGA GACGTATTCC CATTCAGTAT GCCAAACGGC AGGTCGGTCG CAAAGTATAC GGCGGGCAGA GCACCCACAT GCCGCTCAAG GTGAATATGT CCGGGGTGAT TCCACCGATA TTCGCATCCA GCATAATATT ATTGCCCGCG ACCCTGTCAG GTTGGTTTGC GAATGTGCCA GGTATGGAGT GGTTGGCGCG CTTCGGTCAG GCGTTGAGTC CGGGCTCTGC CCTTTACGTT GTGGTGTTTA CAACGGCGAT CGTATTTTTT GCATTTTTTT ACACGGCCAT GGTCTTTAAT CCTCGGGAAA CGGCGGATAA CCTGAAAAAG TCCGGAGCTT TCGTACCAGG TATCCGACCA GGTGAGCATA CGGCTAAGTA CATGGATCGT ATCCTCACCC GGCTTACGCT CTGGGGCGCC ATATACCTGA CCCTGGTTTG TTTGCTGCCA GAATTTCTCA TTGTGCAGTA CAATGTCCCA TTCTATTTCG GCGGTACGAG TCTGCTGATC GTGGTCGTCG TGATGATGGA CCTGATGGGC CAGATTCAGA GCCATTTGCT GACGCACCAG TATGAAGGGT TGATTCGCAA GAACCCTCTT GGCGGGCGGT GA
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Protein sequence | MAGLRSIGGA AQGAGKINEL RNRILFLLGA LLVFRVGAHI PVPGIDPAAM ATFFNQQRGT ILGMFNMFSG GALSRLTVFA LGIMPYISAS IIFQLAGSVF PKLEELKKEG EAGRRKITEY TRYATVILAL MQGLGIAIAI EKMHAGTVPV VISPGPLFLF TTTISLACGT VFLMWIGEQI TERGIGNGIS MIIFAGIVAG LPDAIGTTFE LMKTGQFQPL FVVALFVLAL AVTGFVVFME SAQRRIPIQY AKRQVGRKVY GGQSTHMPLK VNMSGVIPPI FASSIILLPA TLSGWFANVP GMEWLARFGQ ALSPGSALYV VVFTTAIVFF AFFYTAMVFN PRETADNLKK SGAFVPGIRP GEHTAKYMDR ILTRLTLWGA IYLTLVCLLP EFLIVQYNVP FYFGGTSLLI VVVVMMDLMG QIQSHLLTHQ YEGLIRKNPL GGR
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