Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0509 |
Symbol | |
ID | 6876465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 476724 |
End bp | 477266 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642788386 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002218970 |
Protein GI | 198282649 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0543565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000388642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAAGCAC GTTTACATGC GTTGTATAAA ACCTCCATTG CGCCCAAACT GATGCAGGAG TTTGGCTTCA GTAGTGTCAT GGAAGTGCCA AAATTGCTTA AGATCACTCT GAACATGGGG GTCGGCGAGG CGGTTGGTGA TAAAAAGGTG CTGGAAGCCG CGGTGGGGGA CATGACCAGG ATTGCAGGGC AGAAGCCGGT AGTCACGCGT GCGCGAAAGT CTGTGGCGGC ATTTAAAATT CGCGATGGCT ATCCGATTGG ATGTATGGTG ACGTTGCGGG GGATCGTGAT GTACGAATTT TTGGATCGCC TCGTCAGTGT CGCTATCCCC CGAATCCGGG ACTTTCGCGG GCTTTCGCCG AAGTCTTTTG ATGGGCGTGG AAATTATACG ATGGGCGTGA AAGAGCAGAT CATATTCCCG GAAATTGAAT ATGACAAAAT CGATCGTTTG CGCGGGTTGG ACGTGGTGTT TACCACCACC GCCAAGAATG ATGAAGAGGG CCTTGGGCTG TTGAAAGCCT TCAAGATGCC CTTCCGGCCT TGA
|
Protein sequence | MEARLHALYK TSIAPKLMQE FGFSSVMEVP KLLKITLNMG VGEAVGDKKV LEAAVGDMTR IAGQKPVVTR ARKSVAAFKI RDGYPIGCMV TLRGIVMYEF LDRLVSVAIP RIRDFRGLSP KSFDGRGNYT MGVKEQIIFP EIEYDKIDRL RGLDVVFTTT AKNDEEGLGL LKAFKMPFRP
|
| |