Gene Lferr_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0509 
Symbol 
ID6876465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp476724 
End bp477266 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID642788386 
Product50S ribosomal protein L5 
Protein accessionYP_002218970 
Protein GI198282649 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0543565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000388642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCAC GTTTACATGC GTTGTATAAA ACCTCCATTG CGCCCAAACT GATGCAGGAG 
TTTGGCTTCA GTAGTGTCAT GGAAGTGCCA AAATTGCTTA AGATCACTCT GAACATGGGG
GTCGGCGAGG CGGTTGGTGA TAAAAAGGTG CTGGAAGCCG CGGTGGGGGA CATGACCAGG
ATTGCAGGGC AGAAGCCGGT AGTCACGCGT GCGCGAAAGT CTGTGGCGGC ATTTAAAATT
CGCGATGGCT ATCCGATTGG ATGTATGGTG ACGTTGCGGG GGATCGTGAT GTACGAATTT
TTGGATCGCC TCGTCAGTGT CGCTATCCCC CGAATCCGGG ACTTTCGCGG GCTTTCGCCG
AAGTCTTTTG ATGGGCGTGG AAATTATACG ATGGGCGTGA AAGAGCAGAT CATATTCCCG
GAAATTGAAT ATGACAAAAT CGATCGTTTG CGCGGGTTGG ACGTGGTGTT TACCACCACC
GCCAAGAATG ATGAAGAGGG CCTTGGGCTG TTGAAAGCCT TCAAGATGCC CTTCCGGCCT
TGA
 
Protein sequence
MEARLHALYK TSIAPKLMQE FGFSSVMEVP KLLKITLNMG VGEAVGDKKV LEAAVGDMTR 
IAGQKPVVTR ARKSVAAFKI RDGYPIGCMV TLRGIVMYEF LDRLVSVAIP RIRDFRGLSP
KSFDGRGNYT MGVKEQIIFP EIEYDKIDRL RGLDVVFTTT AKNDEEGLGL LKAFKMPFRP