Gene Lferr_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0506 
Symbol 
ID6876462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp475739 
End bp476014 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content45% 
IMG OID642788383 
Productribosomal protein S17 
Protein accessionYP_002218967 
Protein GI198282646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0458965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000246265 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGG CGAAAAATCC GCGTAGTCTG GTTGGTACGG TAGTCAGCAA CCTGATGGAT 
AAAAGTATAG TGGTGAATGT TGAGCGTCGT ATTCAGCATC CACTTTATAA AAAATATATT
CGACGGTCCA AGAAATTTCA CGCCCATGAC GCGGAAAATA TCTGCCATAT CGGGGATATT
GTAAAAATCG AGGAGTGTCG CCCGTTATCG AAAACCAAAA GTTGGCGTTT GGTAAGTGTG
CTCGCCGAAG GCGTCATAGA GGGAGATAAC GCATGA
 
Protein sequence
MTEAKNPRSL VGTVVSNLMD KSIVVNVERR IQHPLYKKYI RRSKKFHAHD AENICHIGDI 
VKIEECRPLS KTKSWRLVSV LAEGVIEGDN A