Gene Lferr_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0503 
Symbol 
ID6876459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp474457 
End bp475119 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID642788380 
Productribosomal protein S3 
Protein accessionYP_002218964 
Protein GI198282643 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.216514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000339097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACAAA AAACCAATCC AATCGGACTG CGTCTGGGAA TCATTAAGAA TTGGAATTCC 
CGGTGGTATG GCAAAAGCGA CTTCCAGGAG AAGCTGCTTG AAGATATCAA GGTCCGGCAG
TTTATTCGGG AGCGGCTTGC AGGTGGGGCG GTTTCTGACA TTATCATTGA GCGCCCAGCG
CGTAGTGCGC GCATTACCGT ACATACCGCC CGACCGGGTA TTGTGATCGG TAAAAAGGGC
GAAGATATTG AAAAGCTTCG GCATGACGTA CAAAAGCGCA TGGGGGTTCC CGTGCATATC
AATGTGGAGG AAATCCGCAA GCCTGAGCTG GACGCGCAGT TGGTGGCAGA AAGCGTAGCG
CAGCAACTCG TCCGTCGTAT CATGTTCCGG CGGGCCATGA AGCGCGCTGT TACCAATGCC
ATGCGTTTCG GTGCCTTAGG CATGCGCATT AACTGTGCCG GTCGTTTGGG TGGGGCCGAA
ATTGCCCGCA CTGAATGGTA TCGAGAGGGT CGCGTTCCGC TGCACACGTT GCGCGCTGAT
ATTGACTACG GTTTCGCTGA GGCCAACACC ACCTACGGAA TAATTGGGGT GAAGGTATGG
ATTTTCAAAG GTGAAATTCT GGAGTGGAGC ACGGCACAAA CGGCCGCTGC CCGCCAGAAG
TGA
 
Protein sequence
MGQKTNPIGL RLGIIKNWNS RWYGKSDFQE KLLEDIKVRQ FIRERLAGGA VSDIIIERPA 
RSARITVHTA RPGIVIGKKG EDIEKLRHDV QKRMGVPVHI NVEEIRKPEL DAQLVAESVA
QQLVRRIMFR RAMKRAVTNA MRFGALGMRI NCAGRLGGAE IARTEWYREG RVPLHTLRAD
IDYGFAEANT TYGIIGVKVW IFKGEILEWS TAQTAAARQK