Gene Lferr_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0494 
Symbol 
ID6876450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp467781 
End bp469880 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content57% 
IMG OID642788371 
Productelongation factor G 
Protein accessionYP_002218955 
Protein GI198282634 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00484] translation elongation factor EF-G
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00353597 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.39334e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCACGCA CAACCCCTAT CGAACGCTAT CGCAATATCG GCATCATGGC GCACATCGAT 
GCCGGCAAAA CGACTACCAC TGAGCGCATT CTGTTCTACA CTGGCGTCTC TCATAAGATT
GGCGAAGTGC ATGAAGGTAC TGCGGTCATG GACTGGATGG CGCAGGAGCA AGAGCGCGGT
ATCACCATTA CCTCAGCGGC AACCACCTGC TTCTGGAAAG GTATGGATGG GCAGCGTGCC
GAGCACCGGA TCAACATCAT CGACACCCCC GGACACGTCG ACTTCACCAT CGAGGTGGAG
CGGTCCCTGC GGGTGTTGGA TGGCGCCATG GCGGTATTTT GTGCGGTGGG TGGTGTGCAG
CCGCAATCCG AGACCGTATG GCGGCAGGCA AACAAGTACA AGGTGCCCCG TATTGCGTTC
GTCAACAAAA TGGATCGTCA GGGTGCCAAC TTCAAGCGCG TTGTCGATCA GATCGCGACC
AAGCTACGCG GTAACCCCGT GCCGGTTCAG TTGCCCATCG GCGAGGAAGA TCACTTTAGC
GGTGTCATCG ACCTGATGAA GATGAAGTCC ATCAACTGGG ATGATGCACT GCAGGGCACG
CGATTTACCG AAGAAGATAT TCCCCCTGCC TTGCAGGCGG ACGCAGAAGC TGCGCGGCAC
TTCATGGTCG AAGCGATCGC GGACGCCGAT GAAGACGTGA TGATGAAATA CCTCGAAGGT
GAGGAAATCA GCATTGCAGA GTTGCAGGCG GCCTTGCGCA AGGCGACGAT TTCCGGCGCC
GTGGTTCCGG TGTTGTGTGG AAGTGCATTC AAGAACAAAG GGGTACAGGC TGCATTGGAC
GCAGTATTGG ACTACCTGCC TTCGCCTGTC GATATCAAGC CGGTGGAAGG CACGAATCCA
GACAATGGCG AAGAAATCGT CCGTTTCGCC GATGACAGCG AACCTTTCTC CGCGCTCGCG
TTTAAAATCG CGACGGATCC GTTTGTCGGA CAGCTCACTT TTTTTCGGGT GTACTCCGGG
GTGCTCACCG CGGGCTCTAC GGTCCTCAAC CCGGGGCGTA ACCAGAAGGA GCGTATCGGG
CGCGTGTTGC AGATGCACGC CAATGAACGG CATGAAATCA AAGAGGTGCT TGCTGGCGAT
ATCGCCGCCG CCGTCGGACT CAAAACAGCT TATACGGGAG ATACGCTCTG TGACTTGAAT
AAGCCTATTG CTCTGGAGCA GATGGAGTTT CCCGAGCCGG TGATTCATGT CGCGGTCGAA
CCAAAGACCA AGGCGGACCA GGAAAAGATG GGCATTGCTC TGGGGAAGCT TGCGCAGGAG
GATCCGTCGT TTCGGGTCCG TACCGATCAG GAATCCGGGC AGACCATCAT CTCCGGTATG
GGCGAGTTGC ATCTGGAAAT CATTGTCGAC CGCATGAAGC GTGAGTTCGG CGTCGAAGCT
ACTGTGGGTG CGCCGCAGGT GGCGTATCGC GAAACGATCC GCAAGACTGT CGAGTCGGAA
GGCAAGTTTG TTCGCCAGTC AGGCGGTCGT GGCCAATATG GACACGTCTG GTTGCGCCTT
GAACCCCTCG AGCCGGGAAG CGGTTTTGTT TTCGAGAACG GGGTGGTCGG CGGTACGGTA
CCCAAGGAGT TTATCAACCC TACTGAAAAG GGTGTTGAAG AAGCGCTGGA AAATGGTATC
ATTGCCGGCT TCCCAGTGGT GGACGTCAAG GTCACCATTT TTGACGGTTC ATATCATGAT
GTCGACTCCT CGGAGGCGGC ATTCAAGATC GCGGGGTCGA TGGGTTTCAA GGCGGGTGCG
GCCAAGGCGA ACCCTGTACT GCTGGAACCC ATCTTTGCCG TAGAGGTAGT AACTCCGGAA
GAATATATGG GTGACATCAT CGGCGACATC AACAGCCGTC GCGGCATGAT GCAGGGTATG
GAAGACGAAG CGGGCGCCAA GCTGATCCGC TGCGAAGTAC CCCTGGCGGA GATGTTCGGA
TATGCGACGA CGGTACGTTC GCTTTCCCAG GGTCGGGCCA CCTATACCAT GCAGTTCGAG
AAGTATATGG AAGTCCCCGG CCATGTGGCC GAGGCCATTG TCAAGAAAAG TCAGCGCTAG
 
Protein sequence
MARTTPIERY RNIGIMAHID AGKTTTTERI LFYTGVSHKI GEVHEGTAVM DWMAQEQERG 
ITITSAATTC FWKGMDGQRA EHRINIIDTP GHVDFTIEVE RSLRVLDGAM AVFCAVGGVQ
PQSETVWRQA NKYKVPRIAF VNKMDRQGAN FKRVVDQIAT KLRGNPVPVQ LPIGEEDHFS
GVIDLMKMKS INWDDALQGT RFTEEDIPPA LQADAEAARH FMVEAIADAD EDVMMKYLEG
EEISIAELQA ALRKATISGA VVPVLCGSAF KNKGVQAALD AVLDYLPSPV DIKPVEGTNP
DNGEEIVRFA DDSEPFSALA FKIATDPFVG QLTFFRVYSG VLTAGSTVLN PGRNQKERIG
RVLQMHANER HEIKEVLAGD IAAAVGLKTA YTGDTLCDLN KPIALEQMEF PEPVIHVAVE
PKTKADQEKM GIALGKLAQE DPSFRVRTDQ ESGQTIISGM GELHLEIIVD RMKREFGVEA
TVGAPQVAYR ETIRKTVESE GKFVRQSGGR GQYGHVWLRL EPLEPGSGFV FENGVVGGTV
PKEFINPTEK GVEEALENGI IAGFPVVDVK VTIFDGSYHD VDSSEAAFKI AGSMGFKAGA
AKANPVLLEP IFAVEVVTPE EYMGDIIGDI NSRRGMMQGM EDEAGAKLIR CEVPLAEMFG
YATTVRSLSQ GRATYTMQFE KYMEVPGHVA EAIVKKSQR