| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0492 |
|---|
| Symbol | rpsL |
|---|
| ID | 6876448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 466880 |
|---|
| End bp | 467251 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642788369 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_002218953 |
|---|
| Protein GI | 198282632 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00450059 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000284598 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAT TAAATCAGCT CGTGCGCAAA CCACGCAAGC GGCCTGTAGC CAAAAGCAAG
GTTCCGGCGT TGGACGCCAA CCCGCAGAAG CGCGGCGTGT GTACCCGTGT TTACACGACG
ACGCCTAAAA AGCCCAACTC GGCATTGCGT AAGGTCGCCC GTGTGCGTCT CACCAATGGT
TTTGAGGTCA GTAGTTATAT TCCCGGCGAA GGGCATAACC TGCAGGAGCA CTCAGTGGTG
CTGATTCGCG GCGGTCGTGT CAAGGATCTT CCCGGTGTGC GCTATCACAT CGTGCGTGGC
ACCCTGGACA CTGCCGGTGT CAAAAACCGT AAACAGTCGC GTTCCAAGTA TGGCGCCAAG
CGTCCAAAGT AA
|
|---|
| Protein sequence | MPTLNQLVRK PRKRPVAKSK VPALDANPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVSSYIPGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG TLDTAGVKNR KQSRSKYGAK
RPK
|
|---|
| |