Gene Lferr_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0485 
Symbol 
ID6876441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp455578 
End bp456111 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID642788362 
ProductNusG antitermination factor 
Protein accessionYP_002218946 
Protein GI198282625 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00514524 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000162097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATGC GTTGGTATGT GGTTCATGCG TTCTCGGGCT TCGAGAAAAA GGTGCAGGGC 
GAGATCCGCG AGCGTGCCAA TCGGGAAGGG CTTGCCGACA AGTTTGGTGA GATCCTCGTT
CCCGTCGAAG AAGTCGTGGA AATGCGAAAT GGCCAAAAAA CGAGCTCGCA GCGAATGTTT
TACCCCGGTT ATGTCTTGGT GCAGATGGAA ATGGACGACG TGACCTGGCA CCTCGTCAAG
AGCACACCAC GGGTCACCGG ATTTGTCGGC GGCTCTGTAG GGCGCCCACA TCCGCTGAGT
GATGCGGAGA CCAACGCCAT CATGGACCGC ATCAAGGAAG GCGTTGAGAA GCCGCGTCCG
AAATTCAGTT TTGACGCGGG TGAGCAGGTG CGTGTCGTAG ATGGCCCGTT CAAGGATTTC
AACGGCGTCG TCGAGGAAGT CAATTTCGAA AAGAGCAAGT TACGGGTTTC GGTGACCATC
TTTGGTCGCT CCACGCCCGT AGAATTGGAT TTTGGCCAGG TCGAGAAGGC CTGA
 
Protein sequence
MSMRWYVVHA FSGFEKKVQG EIRERANREG LADKFGEILV PVEEVVEMRN GQKTSSQRMF 
YPGYVLVQME MDDVTWHLVK STPRVTGFVG GSVGRPHPLS DAETNAIMDR IKEGVEKPRP
KFSFDAGEQV RVVDGPFKDF NGVVEEVNFE KSKLRVSVTI FGRSTPVELD FGQVEKA