Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0477 |
Symbol | |
ID | 6876429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 448867 |
End bp | 449310 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788350 |
Product | NusB antitermination factor |
Protein accession | YP_002218938 |
Protein GI | 198282617 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.144816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000124521 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCA GTCGCCGTCG TCTGGCGCGT CAAGCTGCGG TTCAGGCGCT CTACCAGTGG CAGATGAATC CGGGCCATTG TGCGGAGATC GAGTTGCAAT TTACCTCCGA TCCGGAGCGC CTGCAGGGCG CCGATGTCGC TTTCTTTAAA AGCCTCTGGC AAGGGGTCTG TGCCGCAATC TCCGAACTGG ACCCTGCCAT CGCCGAGGAA GTTCAGGACC GTCGCTGGGC CGATGAGGTC AGCGAGGTCG AACGGGCGAT CCTGCGTCTG GCGGCCTGCG AATTGCGGGA CTATCCGCAA ACGCCATACC GGGTGATCAT CAATGAAGCC ATAGAACTGG ACAAAGACTT TGGTGGTGAG CAAGGCCATC GCTTCGTCAA CGCCGTCCTG GATAAACTCG CGCAGAGGTG GCGGTCTGCG GAGATGTTGC AGGCCGGTCG CTGA
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Protein sequence | MKISRRRLAR QAAVQALYQW QMNPGHCAEI ELQFTSDPER LQGADVAFFK SLWQGVCAAI SELDPAIAEE VQDRRWADEV SEVERAILRL AACELRDYPQ TPYRVIINEA IELDKDFGGE QGHRFVNAVL DKLAQRWRSA EMLQAGR
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