Gene Lferr_0476 details

Gene Information

• Locus tag: Lferr_0476
• Symbol: ribH
• ID: 6876428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 53993
• Kingdom: Bacteria
• Replicon accession: NC_011206
• Strand: +
• Start bp: 448392
• End bp: 448856
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642788349
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_002218937
• Protein GI: 198282616
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.457092
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.000130798
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATTCGTC ATATCGAAGG CAGTCTGCAG GCCGGTGAGC ATCGCTTTGC CCTGTTGGTC 
AGCCGTTTCA ACAGCTTTAT CACCCAGCAG TTGGAGCAGG GTGCCATCGA CGCGTTGCGC 
CGTCACGGTG CAAAAGAAGA ACAGCTTCAT GTCGTTCATG TCCCGGGTGC TTATGAGATG 
CCGCTGATCG CACAGAAGCT GGCGCGTAGC GGTAATTATG ACGCCGTGCT TTGTCTGGGC 
GCAGTGATTC GCGGCGGTAC CCCACATTTT GATTATGTCG CGGCCGAAGT GTCCAAGGGG 
GTGGCGCAGG TATCCATGGA CACGGGAGTG CCGGTGATTT TTGGGGTGCT GACCACGGAC 
AGCATTGAGC AGGCCATTGA GCGCGCCGGA ACCAAAGCGG GCAACAAGGG CTTCGATGCG 
GCCATGACTG CACTGGAAAT GGTGCAGTTG TTGCGTCAGA TCTGA 

 

Protein sequence

MIRHIEGSLQ AGEHRFALLV SRFNSFITQQ LEQGAIDALR RHGAKEEQLH VVHVPGAYEM 
PLIAQKLARS GNYDAVLCLG AVIRGGTPHF DYVAAEVSKG VAQVSMDTGV PVIFGVLTTD 
SIEQAIERAG TKAGNKGFDA AMTALEMVQL LRQI