| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0441 |
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| Symbol | |
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| ID | 6876393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 416406 |
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| End bp | 417455 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642788314 |
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| Product | twitching motility protein |
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| Protein accession | YP_002218902 |
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| Protein GI | 198282581 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000176811 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATCT CAGAACTGCT CGCCTTCGCG GTGAAAAACA ACGCGTCGGA CACCCATATC
TCGGCAGGTC TGGCGCCGAT GCTGCGGATC AATGGCGACA TCCGTCCGCT GAATGTGGAG
GCGCAGGACA GCAAAACCGT ACACAGCATG ATTTACGACA TCATGAACGA TTTCCAGCGG
AAGGGGTATG AGGAGAACCT GGAAATCGAC TTTGCCTATG AACTGCCGGG TGTGGCGCGT
TTTCGGGTTA ACGCCTTCAA CCAGGACCGC GGACCGGCTG CGGCGTTCCG GACGATTCCT
GCGAGTGTGC TGACACTGGA AGACCTCAAT GCGCCCGGTT CTTTCAAGGA GATCATCAAC
GTGCCGCGCG GACTGGTATT GGTCACGGGG CCGACCGGAT CGGGTAAGTC AACGACGCTG
GCAGCGATGG TGGATCATAT CAATGCGAAT CGCGCCGACC ACATCATTAC CATTGAAGAT
CCCATCGAAT TTCTGCACAC CCCCAAGAAG TGCCTGATCA ACCAGCGCGA GGTGGGTGCC
AGCACCCACT CCTTTGAAAA CGCCCTGCGC TCGGCTTTAC GTGAAGATCC CGATATCATT
CTGGTGGGCG AGCTACGTGA TCTGGAGACC ATGCGCCTGG CGCTGACCGC GGCAGAGACC
GGCCATATCG TGTTTGCGAC GCTGCATACC AGTTCCGCAC CAAAAACCAT CGACCGTATT
GTCGATTCCT TTCCCGGGGG GGAAAAGGAT ATGGTCCGCG CCATGCTGTC CGAATCCCTG
CGCGCGGTCA TTTCCCAGAC TCTGCTCAAA ACGGCCGACG GCAAGGGAAG GGTGGCCGCG
CACGAAATCA TGATCGCCAC CCCGGCTATC CGCAACCTGA TTCGTGAGAA CAAGGTCGCG
CAGATGTACT CGGTGATCCA GACCGGGCAA AATCAGGGTA TGCAAACCCT GGACCAGTGT
CTTGCCGATC TGGTGCGTGC CCACAAGGTG ACTCACGAAG ATGCGCTGCG CCGGGTACAG
AACAAAGACA GCTTCATGAA CGTGGCCTGA
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| Protein sequence | MDISELLAFA VKNNASDTHI SAGLAPMLRI NGDIRPLNVE AQDSKTVHSM IYDIMNDFQR
KGYEENLEID FAYELPGVAR FRVNAFNQDR GPAAAFRTIP ASVLTLEDLN APGSFKEIIN
VPRGLVLVTG PTGSGKSTTL AAMVDHINAN RADHIITIED PIEFLHTPKK CLINQREVGA
STHSFENALR SALREDPDII LVGELRDLET MRLALTAAET GHIVFATLHT SSAPKTIDRI
VDSFPGGEKD MVRAMLSESL RAVISQTLLK TADGKGRVAA HEIMIATPAI RNLIRENKVA
QMYSVIQTGQ NQGMQTLDQC LADLVRAHKV THEDALRRVQ NKDSFMNVA
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