Gene Lferr_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0438 
Symbol 
ID6876390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp414537 
End bp414815 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content58% 
IMG OID642788311 
Productprotein of unknown function YGGT 
Protein accessionYP_002218899 
Protein GI198282578 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000112129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAC TGAGTATCAT GGCGGCACGC CTTACCAGTC TCATTCTGAC CCTGCTGTTC 
TGGGCAATTC TCATCCGTGC CATATTGTCC TGGGTACAGC CCGATCCACG CAATCCGGTC
ATGCAGTTTC TGGACCGGCT TACCGGACCC ATTCTCTATC CCCTGCAGCG GATCATCCCG
CCCATCGGCG GATTCGACCT CAGTCCGCTG GCAGCCCTGT TGATCATCGA AGTGCTCAGG
GGGCTGCTGG TTCATGCCAT CCTCAATCTG GGCGGGTAA
 
Protein sequence
MTELSIMAAR LTSLILTLLF WAILIRAILS WVQPDPRNPV MQFLDRLTGP ILYPLQRIIP 
PIGGFDLSPL AALLIIEVLR GLLVHAILNL GG