| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0434 |
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| Symbol | |
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| ID | 6876386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 411352 |
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| End bp | 412365 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788307 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002218895 |
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| Protein GI | 198282574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.532566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000108123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTGGC TCAAACGCCT TTTGGTTCTG GTCATCATCG TCGTGGTTGC CTTTGGCGCC
TATGCATACT TCCAGATTTC TGATTACTAT CCCAACACCG ACGATGCCTA TCTGCATGCC
CATGTCGTGA ACATCGCACC GCGGGTTACA GGACATATTG TCGCTATTTA TGTGCATGAT
AATCAGGTGG TGCAGGCTGG ACAGCCCCTG GTCGAGGTGG ATCCGCGGGC CTACGTCTAC
GACGTGCAGA AAGCCGAGGC CGAACTGACC CAGGCGGAAC GGCAGACGGC CGCCATTCAG
GCCAATATTG CCGGAGCGCG CGCCAATATC AGCGCCGACC AGGTCAATTA CCAGAATGCC
CGGCACAACG CCCAACGCGC GGCGGCGCTG GCGGCGCAGA AATATCTGTC TGCGCAACAG
GCGGATAACG AAATGACCGC GGCGAAAAGT GCCGGGGCGC GCCTGACCGC AGATCAGGCG
GCCCTGGCGG AGACCCAGGC GCAGCAAGTC CTCAATGGTG CCCGCATCGC CGCCGCCAAG
GCCGCCCTGC GCACAGCCCG GCTCTATCTG TCTGAAACCA CGCTCTACGC GCCCATCGCG
GGGGTCGTCA GCAAAGTGGA TAAAATCCAT GTGGGCGACG TGGTCAATGT CAATCAGGAT
CTGTTCCCCC TGATCGGCAA TGCGGAATAC TGGGTCGAGG CCAACTACAA GGAAACCGAT
CTCAGCCGGG TACACCCGGG ACAGAGTGCG AAAATCACTG TGGACATGTA CCCCGACCAT
CCCTTCAAGG GAAAGGTGGT GAGCCTGAGC GGCGGTGCCG GAAACGCCTT CTCCCTGCTC
CCCCCGGAAA ATGCTACGGG TAACTGGGTA AAGGTGACAC AGCGGGTACC GGTGCGTGTG
CTCATCACCA ATCCGGACTC CAGGTTCCCG CTACGGATCG GTACCAGCGC GTCGGTAACG
GTGGATACGG GCGGAGCACC GGGCTGGGTC AAGGCGCTGC GGCCGATCTT CTGA
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| Protein sequence | MRWLKRLLVL VIIVVVAFGA YAYFQISDYY PNTDDAYLHA HVVNIAPRVT GHIVAIYVHD
NQVVQAGQPL VEVDPRAYVY DVQKAEAELT QAERQTAAIQ ANIAGARANI SADQVNYQNA
RHNAQRAAAL AAQKYLSAQQ ADNEMTAAKS AGARLTADQA ALAETQAQQV LNGARIAAAK
AALRTARLYL SETTLYAPIA GVVSKVDKIH VGDVVNVNQD LFPLIGNAEY WVEANYKETD
LSRVHPGQSA KITVDMYPDH PFKGKVVSLS GGAGNAFSLL PPENATGNWV KVTQRVPVRV
LITNPDSRFP LRIGTSASVT VDTGGAPGWV KALRPIF
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