Gene Lferr_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0428 
Symbol 
ID6876380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp406787 
End bp407803 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID642788301 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_002218889 
Protein GI198282568 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.04585e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.64459e-10 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTACC GCCTGCGTAT TGAACCGAGC GGCCACGAGA TGGATTGCGA CAGAGATGAA 
ACCATCCTGG AGGCCGCTCT GCGGCATGGT TTTCATATTC CCTACGGTTG TCGCAATGGT
ACCTGTGCGA CCTGCAAGGG ACGTATTCTC CGTGGAGAAG TGGATTACGG GAAGGTGGAG
GAAAAGATCT TGTCGGCCGC CGAGAAGGAT GCGGGCCTGG CGCTCTTCTG TCAGGCAATA
CCCCTGTCCG ATGTGACGAT AGAAGTTCGG GAGATCGGGG CCACCAAGGA TATCCAGATT
AAAACACTAC CGTCCCGGGT AGCAAGAATA GTCGATTTGG CACCCGATGT GCGCGCCGTT
TTTCTAAAAA TTCCGACTAC GGAGCGTCTC CAGTTCCTCC CTGGACAGTA TATCGACATT
CTCCTGAAAG ACGGTGGCCG ACGGGGTTTT TCCCTCGCCA ACATACCCGG TGACGATGCG
CTCCTGGAGC TGCACATCAA AAGAGTACCT GGTGGCGTCT TTACCGGGCA TGTATTCAGT
GCGATGAAGG AAAAGGACAT CTTGCGTTTC GAGGGACCAT TGGGCACTTT TTTCATTCGT
CAGGAATCCA CCCGTCCTTT ACTGATGGTC GCTACCGGTA CCGGTTTTGC ACCTATTAAG
GCGATGCTCG AGTCGCTCTT TGCGCAGGGC TCCATACGTC CGATCCATTT TTATTGGGGT
GTGCGCCATC CGGAGGACTT TTATTATCAG GATTTGCTGA GGGAATGGCA GGCGCGTCAT
GACCATTTTC AGGTAACCCG GATAGTATCC CGTCCCGATG CTTCCTGGTC TGGAGCAACC
GGCTATGTTA CGACACAAGT GATCCACGAC TTTCCGGACG CGAGCACGCT CGACGCCTAT
ATTTGTGGGC ACCCGGACAT GGTGTTTTCC TTAAGCGCCG CTTTACAGGG AGCTGGATTG
AATCCGGAAC ACATTTATGC AGATGCATTT GTATTTGCCA AAGCAAAAAC AAGCTGA
 
Protein sequence
MTYRLRIEPS GHEMDCDRDE TILEAALRHG FHIPYGCRNG TCATCKGRIL RGEVDYGKVE 
EKILSAAEKD AGLALFCQAI PLSDVTIEVR EIGATKDIQI KTLPSRVARI VDLAPDVRAV
FLKIPTTERL QFLPGQYIDI LLKDGGRRGF SLANIPGDDA LLELHIKRVP GGVFTGHVFS
AMKEKDILRF EGPLGTFFIR QESTRPLLMV ATGTGFAPIK AMLESLFAQG SIRPIHFYWG
VRHPEDFYYQ DLLREWQARH DHFQVTRIVS RPDASWSGAT GYVTTQVIHD FPDASTLDAY
ICGHPDMVFS LSAALQGAGL NPEHIYADAF VFAKAKTS