| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0427 |
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| Symbol | |
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| ID | 6876379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 406106 |
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| End bp | 406711 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788300 |
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| Product | ribonuclease T |
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| Protein accession | YP_002218888 |
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| Protein GI | 198282567 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0923721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000415989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGGCTT TGGCCGGACG GTTTCGCGGC TTTTTGCCGG TAGTGGTCGA TGTGGAAACG
GCAGGATTTG ACTCTGAACG TAATGCGCTG CTGGAAGTGG CTGCGATCAT CATCGGTGGC
GAAGTGGGGC AGTTGCGGCC CGTAGCCACC CACCACTTTC AGGTCCAGCC CTTTGCCGGG
GCGGTGCTTG ACCCGGCAGC GCTGGCGTTT ACGGGTATTG ATCCCTTTCA GGCACTGCGC
GGCGCTGTTT CCGAGGAGGA AGCCCTGCGC GGGATTTTCA GGCCGGTGCG CACTGCCGTA
AAGGTGGCTC AATGCCGACG TGCCATTCTC GTGGGGCACA ACGCCGCTTT TGACCTGTCC
TTTATCAAGG CCGCAGAAAA ACGGACCGGC GTCAAGAATA ACCCCTTTCA TCTTTTCAGT
ACCTTCGACA CCGTTAGTCT GGCCGGACTG GCCTATGGTG AGACCGTGCT GGCCAAGGCT
GCCCTGGCAG CCGGCCTGGA CTGGGATCAT ACCCAAGCCC ATTCGGCACT CTATGATGCG
CGCCAGACGG CGGAATTGTT CTGCCGGATC GTGAATCGCT ACGATCTCAA CCGGGAGTAT
CCGTGA
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| Protein sequence | MAALAGRFRG FLPVVVDVET AGFDSERNAL LEVAAIIIGG EVGQLRPVAT HHFQVQPFAG
AVLDPAALAF TGIDPFQALR GAVSEEEALR GIFRPVRTAV KVAQCRRAIL VGHNAAFDLS
FIKAAEKRTG VKNNPFHLFS TFDTVSLAGL AYGETVLAKA ALAAGLDWDH TQAHSALYDA
RQTAELFCRI VNRYDLNREY P
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