Gene Lferr_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0424 
Symbol 
ID6876376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp403891 
End bp404610 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID642788297 
Productleucyl/phenylalanyl-tRNA/protein transferase 
Protein accessionYP_002218885 
Protein GI198282564 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.699536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000312501 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGCCCTG AGGGCGTCCG TCCGGTCCTC CTGCAATGCC ATGACCGGTC AGCCCCCTTC 
CCCGACCCGG AGCAGGCCGA CGGCAACCTG GTCGCCATCG GCGGCGATTT ATCCAGGGAA
CGCCTGCTCC TGGCCTATGC CCACGGCATC TTTCCCTGGT TCGGCGAGGA AGACCCCATT
CTCTGGTGGT CACCTGATCC CCGCGGTATT CTCGAGCCCC CGGCGATACA CGTCAGTCGC
AGTCTGCGCA AATCCGCCCG TAACCGTGAC TGGCAATATC GCATGGACAG CAATTTTGCC
GGTGTCATCG ACGCTTGCGC AGCGCCGCGC CCAGGGCAGG GAGATACCTG GATTACCCCG
GCGGTGCGGG CCGCCTACCT GGACCTGTTC GCGGCCGGAG CAGCACATTC CATAGAAGTC
TATCAGCAGG ACCGTCTGGT CGGGGGACTT TACGGCGTAG CCCTCGGCGG ACTTTTTTTC
GGGGAGTCCA TGTTCAGTCG GGTGCCCGAT GCCTCCCGGC TGGCTCTCGT TCTGCTGGCG
CGTCATCTCC AGCATTGGGG CTTTGGCCTG ATCGATACCC AGTTCATCAC CCCGCATCTG
CAGAGCATGG GCGCGCGGGA AATACCCCGT CGTGATTTCC TGCGTGCCCT TGCCGATCTG
CGCACCCAAC ATACGCAAGC AGACTGGAAC ATCTCGTTAC CGCTGACCGG GATGTTTTAA
 
Protein sequence
MRPEGVRPVL LQCHDRSAPF PDPEQADGNL VAIGGDLSRE RLLLAYAHGI FPWFGEEDPI 
LWWSPDPRGI LEPPAIHVSR SLRKSARNRD WQYRMDSNFA GVIDACAAPR PGQGDTWITP
AVRAAYLDLF AAGAAHSIEV YQQDRLVGGL YGVALGGLFF GESMFSRVPD ASRLALVLLA
RHLQHWGFGL IDTQFITPHL QSMGAREIPR RDFLRALADL RTQHTQADWN ISLPLTGMF