Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0422 |
Symbol | |
ID | 6876374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 402124 |
End bp | 402828 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642788295 |
Product | dethiobiotin synthase |
Protein accession | YP_002218883 |
Protein GI | 198282562 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000789598 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGGGG AGCATCCCTC GCCGCGTCGG CATGCGGGTC CACTGCGTGG ACTATTGGTT ACCGGTACGG ATACGGGTGT CGGCAAAACC GCTGTCACCG CTGCCCTCGC GCACAAATGC GCGCAGCACG GAATGCTGGT GGCGGCCCTC AAACCCATTG TTTCTGGAGT CGAGGCCGAC GGTACCTGGG AGGACGTGGA AATTTTGCGC GCCGCCAGCC AGCCCCCGCG CAGTGTTGCC GAAACGGGTC TCTATGCTTT CGACCCGCCA GTGGCGCCCC ACTGGGCGGC ACATCAGGCG GGCGTCACCG TCGAGCGTGG GCGGGTGGCG GCTTTCGTCC GGATGCAATC CGCGGCGATG GATTGTGTGC TGGTGGAGGG TGCCGGTGGT TTTCTTACCC CATTGGGCGA TGACTGGGGC GTTGCCGAAC TGGCCAGGGA TCTGCATTTT CCTGTGCTGT TGGTGGTGGG CTTGCGGCTC GGTGCCATCA ACCACACGCT GCTGAGCGTC GAAGCCATCC GCGCACGGGG ACTGCGCTTG GCCGGGTGGG TGGCAAACAC CCTGAATCCC GCAGTCGCGG TGGGCACATT GGAGACCTTG CAAGGGCGGC TGGCGGCGCC CTGTCTGGGG GTGCTGCCTT ACGCGCCACA CTGGTCTCCC GCCATCCTGA GCCCTTGTCT ATCCCTTCCT GATGTCCTGT ATTGA
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Protein sequence | MTGEHPSPRR HAGPLRGLLV TGTDTGVGKT AVTAALAHKC AQHGMLVAAL KPIVSGVEAD GTWEDVEILR AASQPPRSVA ETGLYAFDPP VAPHWAAHQA GVTVERGRVA AFVRMQSAAM DCVLVEGAGG FLTPLGDDWG VAELARDLHF PVLLVVGLRL GAINHTLLSV EAIRARGLRL AGWVANTLNP AVAVGTLETL QGRLAAPCLG VLPYAPHWSP AILSPCLSLP DVLY
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