| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0409 |
|---|
| Symbol | |
|---|
| ID | 6876361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 388926 |
|---|
| End bp | 389873 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642788282 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002218870 |
|---|
| Protein GI | 198282549 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.535242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0010651 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT GCGTTATTAT TGTTAACTAT AATGGCGTAT CAAAAACACT TGACGCAATT
TCTTCCTGTC TTGCGGAGGG CGTGTTGGCG CAACATTGTA TCGTCATCGA TAATGGTAGC
GATGACGGGT CGGTGGAGGT GATTTCGCAA CGGTTTCCCG ACATCAAGAT ATTGGCGAAC
AGTTGTAATG CCGGCTTCGC CCGTGCGGTC AACCAGGGGT TGGCGGTCGC TGATCGTGAT
TTCGTCATGG TTCTGAATAA TGACGCGCAA CTATTATCGG GTACGCTGGA GGCTGTGACA
TGCTGTTTTC TGGCCTGGCC TCGAGCGGCC CTCGTGGGTG CCCGTCTGAT TGATCCGGTC
GGTCGTACAC AAAATGTCGT GGCGGCATTG CCGCGATTCT GGCACGAAAT ATTGCCAAGG
GCACTGCTCA AAAGAGTGGC ACCAAAATAC TTCGGTGGGC GTCTATCAGG GGAGCGTCAA
TCGGTAAATG TTCCCAGCCT GATCGGTGCA GCAATGACGG TACGCCGTTC TTTCTTGCCT
CAATTGGGCA TGTTGGACGA AGATTTCTTC TTTTATCTGG AAGAAACGGA ATGGTGCGCA
CGTGCCCATC GTCTTGGATT CGACGTGGTG TTTTGTCCAG ATGCCAGGGT AGAGCACGCC
CTTGGTGGCA CCGCCAGGAA ATTTCAGGTA GGGTCGCGCA TTGAATTTCA GCGCTCACGG
TTGCTCTATG CCCGTAAGGT GGAGGGCCGC ATTCCCTGGG TGGTTTTATC TTTGTGGATG
CCAGTAAAAG CGGCAATTGA CTTTCTTGCC AATGGAATAG CAATGGTGCT TACTCTCGGG
CTTCTTCCTC GTCAGCGGAA ACGTTGTTTG ACCTACGGAG GAATACTGAT GTGGCATCTT
CTGTTCCGGC CAGCACACTG GGGCCTGCCG GGGAAGTGCG GTAAATAA
|
|---|
| Protein sequence | MKFCVIIVNY NGVSKTLDAI SSCLAEGVLA QHCIVIDNGS DDGSVEVISQ RFPDIKILAN
SCNAGFARAV NQGLAVADRD FVMVLNNDAQ LLSGTLEAVT CCFLAWPRAA LVGARLIDPV
GRTQNVVAAL PRFWHEILPR ALLKRVAPKY FGGRLSGERQ SVNVPSLIGA AMTVRRSFLP
QLGMLDEDFF FYLEETEWCA RAHRLGFDVV FCPDARVEHA LGGTARKFQV GSRIEFQRSR
LLYARKVEGR IPWVVLSLWM PVKAAIDFLA NGIAMVLTLG LLPRQRKRCL TYGGILMWHL
LFRPAHWGLP GKCGK
|
|---|
| |