Gene Lferr_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0403 
Symbol 
ID6876355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp382189 
End bp383178 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID642788276 
Productmutator MutT protein 
Protein accessionYP_002218864 
Protein GI198282543 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein
[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0220424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG TTCCCGTCGC AACCGGAATC ATTGAAGACG CCTTCGGGCG CCTGCTGGTT 
GCGCTGCGCC CGGAGGGCAA GCCCTGGCCG GGGTTCTGGG AGTTTCCCGG CGGCAAGGTC
GATCCCGGCG AAACGCCGGA ACAGGCGCTG GTCCGGGAAC TCTGGGAAGA GTTGGGGGTT
ACGGTAACCG CGCCGGAACC CTTCCGGGAG CTGGAATATA CCTATCCGGA ACGGACGGTG
CGCGTGCATT TCTACCGGGT GCGGCACTGG ACGGGCACGG CCCATGGTCG CGAGGGACAG
GAAGTACGCT GGCTTTTTCC CTGGGAGATC CCGGCGCTGG AGTGTCTCCC CGCGAACCTC
CGTCTGACTG CGGACGTGTT GGCGGAGGCT CTGCCCCAGC CGCCCCTCTG CCTGATTGCG
GATCCGGGAA GGTTGCCCCT GCCCGATTTC CGGCGCGCAC TGGAGGCGGC CCTTGATGCC
GGATTGCGCT GGCTGGTGTT GCGCTGCAAA GCGGTGCCTG ACGGCTCCAG CGCCGACGTG
TTGGCGGCAC TATGCGCCGG GGCGTTGGCG GGGGGTGTGC AGGTCTACCT CAATCATCCC
GACCCCTTGC CCGGCTGGCC AAGGACCGGT CGTCACCTGA CCCAGGCGCA GTCAGACGCG
GGCGTAAAAC CCGATGAGGC ATTCGGGGTA TCCTGCCATG ACGCTGCGGG CTTGCAACAG
GCGGCGCGTC TGGGCGCGCG TTATGCCTTT CTCTCGCCGA TTTTCCCCAC TTCCAGCCAT
CCGGATACGG AGGCGCTGGG ACCCGAGGTT TTCGCGGCGA TGGCCGCTGA GTCTTCTCTA
CCCCTCATTG CGCTCGGCGG AATGACGGCG GCACGGGTGC CGGAGGCGCT GGCGGCAGGT
GCACGGGGTG TGGCGGTGCT CTCCGGCATT CTCGAAGCGC AGGATCCCGC GGCCGCTACC
CGCGCCTTGC TTCGGCACTG GGAGCGATAA
 
Protein sequence
MPTVPVATGI IEDAFGRLLV ALRPEGKPWP GFWEFPGGKV DPGETPEQAL VRELWEELGV 
TVTAPEPFRE LEYTYPERTV RVHFYRVRHW TGTAHGREGQ EVRWLFPWEI PALECLPANL
RLTADVLAEA LPQPPLCLIA DPGRLPLPDF RRALEAALDA GLRWLVLRCK AVPDGSSADV
LAALCAGALA GGVQVYLNHP DPLPGWPRTG RHLTQAQSDA GVKPDEAFGV SCHDAAGLQQ
AARLGARYAF LSPIFPTSSH PDTEALGPEV FAAMAAESSL PLIALGGMTA ARVPEALAAG
ARGVAVLSGI LEAQDPAAAT RALLRHWER