Gene Lferr_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0398 
Symbol 
ID6876350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp375880 
End bp376500 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID642788271 
ProductGlutathione S-transferase domain 
Protein accessionYP_002218859 
Protein GI198282538 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.165939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.123126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CCAGCAGCAA AAAAACCCTC ATGACGCTCT ACTCCAGCAA CGATTGTGTC 
TTCGCGCACC GTGTGCGTTT CGTGCTGGAA GAGAAGGCTA TGGAATACCA GATCATCGAC
GTCGATCTCG GCAACCGGCC CGAAGACCTT GCGGAACTCA ATCCCTACAA CCAAGTGCCG
ACCTTGGTGG ATCGCGATCT GGCCATTCAC GAATCGGTCC TGATCATGGA GTACCTTGAC
GAGCGGTTCC CCCATCCGCC ACTGATTCCG GTAGACCCCA TATCCCGTGC CAAGGTGCGC
CTGGGTCTCC TGCGTTTCGA CCGTGACTGG TTTGCACCGC TCTTTCAGCC CGGCTACGGT
GCCGAGCAGG TCAAAACCGC CAAGGAACAG ATTCGCAGTA CCCTCGCCGG GCTGAACAGC
ATCTTCAGCC AACAGCGTTA CCTCTTTGGT GACGACCTTT CGGTACTCGA CTGTGCTATC
GCCCCACTCC TGTGGCGCAT GCCGGTACTG GACATCTCTC TACCCGCCGC AGCCCGTGCC
ACCCAGAATT ATATGGATCG CATCTTCGGC ATGGAGAGCT TCAAACGCAG CCTGACGCCT
GCCGAGAAGG CCATGCGCTG A
 
Protein sequence
MATPSSKKTL MTLYSSNDCV FAHRVRFVLE EKAMEYQIID VDLGNRPEDL AELNPYNQVP 
TLVDRDLAIH ESVLIMEYLD ERFPHPPLIP VDPISRAKVR LGLLRFDRDW FAPLFQPGYG
AEQVKTAKEQ IRSTLAGLNS IFSQQRYLFG DDLSVLDCAI APLLWRMPVL DISLPAAARA
TQNYMDRIFG MESFKRSLTP AEKAMR