| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0397 |
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| Symbol | |
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| ID | 6876349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 374136 |
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| End bp | 375878 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788270 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002218858 |
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| Protein GI | 198282537 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0363657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.232299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ATCTCGGCCA TTTCCAGAGC CTGCCCGAGG GCCTCTTCGC ACGCTGTGCC
CGCGCTCCCG GCGGGACCAT CGCCCTGCAA CGACAGGACG ACGTTTTTCA GCCGATGACC
GCAGCAGCCT TCGCCGGACA GGTACGGGCG CGGGCGCGGG GACTTCTGCA CCTGGGGGTG
CGCCGGGGCG AGCGGGTCAT TCTGATGGCG CCCAACTCCG TGGACTGGGC TATCATGGAT
TTTGCCATCC TCAACGTTGG CGCCATTACC GTCCCTCTCT ACCCGACATT CAGCCCGCGC
GAGATTCACT TTGTACTGGG TGACAGCGGC GCCGGGTTGA TACTGCTGGA AGGCGCTGCG
GAATGGCAAC GACTGGGGGG CGAGGGGGGC TGGGGCGTGG CCGACGACCG TATCCTGCTG
CGCGACGCGG CGGCCGCGCA GAACGCCGGC CTGCGCCATT GGGCATCACT GGAGAACGAG
GGAGCAACGG TACCGGATAG CGGGCTGGAA GAACGTCTGG CGGGCTTGCA GCGCCAGCAA
ACCGCAACCA TCGTCTACAC TTCCGGGACG ACGGGTTGGC CCAAGGGCGT CATGCTCAGT
CACGGCAACA TCCTCAGCAA CATCGAAGGC TTTCTGCCAC TGGTACCGTT GCATGCTGGA
CAACGCCTGC TTTCCATACT GCCTCTGTCC CATGTCTTTG AACGCGGTAC CGGGCATTTC
GGCGCCTACC TGCTGGGCCT GGAAGTGGCC TACGCGGAGC GCCCGGACAC CGTCCTCCGC
GACATGGCAA CGTCGCATCC GAACATAGTG GTCGCCGTGC CGCGCGTTTT TCAACTACTC
TATGGTCGGG TACGACGAGG TATCGAAGAC CGACCGGGCC TGCTCGGGCG TTTTCTGCGC
CGGGGGGCAG GGCTCGATCC GCACGGGCGT CCGGCGGCGC GCTGGCAACG TTCCCTTACC
CGCCGCCTGC TGATCCGCAG TCTCCGCAAG AAACTGGGCG GGCGCCTGCG TTTCTTCGTC
TCCGGCGGCG CGCCGCTGGA CGCCGGGATC ACCCGCTTCT TCGTTGACCT GGGATTGCCC
ATTGTGGAAG GGTACGGTAT GACTGAAGCG AGTCCGGTGA TCGCCGCCAA TCCACTGGAA
GCCATTCATC CGGGAACCGT GGGGCGGTTT CTGCCCAATC TCGAGGGGCG CCTGGCCGCA
GATGGCGAAA TCCTGGTGCG CGGCCCGTCC GTCATGCTGG GCTACTGGAA TAACGAGAGT
GCGACGGGCG AGGCACTGGT AGACGGCTGG TTGCACACCG GCGATGTGGG CAGTCTGGAC
CCGGACGGTT ACCTGCGAAT CAGCGACCGC AAGAAAGACC TGATCGTCAA CTCCGCCGGC
GAGAATATCC CGCCGCAAAA AATCGAGATG CGGCTGATGG CACAAGCGCT GATCGAACAG
GCCGTCGTCT TCGGTGACCG AATGCCCTAT CTCGTGGCGC TCATCTTTCC CAATCAGGAA
GTCCTCAAAG CGCGTGCCGT TGACCACGCG GACGAAGCCG CCACCCGCAA GGCCGTCCAG
AAGGCCATTG CGACCGCCCT CGCCGACCTG CCCTCCCATG AACAGGTGAA GCGTTTCGCT
CTGCTGCCGG AAGCACTGAG TGAAACCAAT GGCGAACTGA CACCCACCCT CAAAGTGAAA
CGGCGCGTCG TCGCCGAACA TTACGCTGCT CTGCTGACGC AAATGGGCAG CGGCAAGAGC
TGA
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| Protein sequence | MTIDLGHFQS LPEGLFARCA RAPGGTIALQ RQDDVFQPMT AAAFAGQVRA RARGLLHLGV
RRGERVILMA PNSVDWAIMD FAILNVGAIT VPLYPTFSPR EIHFVLGDSG AGLILLEGAA
EWQRLGGEGG WGVADDRILL RDAAAAQNAG LRHWASLENE GATVPDSGLE ERLAGLQRQQ
TATIVYTSGT TGWPKGVMLS HGNILSNIEG FLPLVPLHAG QRLLSILPLS HVFERGTGHF
GAYLLGLEVA YAERPDTVLR DMATSHPNIV VAVPRVFQLL YGRVRRGIED RPGLLGRFLR
RGAGLDPHGR PAARWQRSLT RRLLIRSLRK KLGGRLRFFV SGGAPLDAGI TRFFVDLGLP
IVEGYGMTEA SPVIAANPLE AIHPGTVGRF LPNLEGRLAA DGEILVRGPS VMLGYWNNES
ATGEALVDGW LHTGDVGSLD PDGYLRISDR KKDLIVNSAG ENIPPQKIEM RLMAQALIEQ
AVVFGDRMPY LVALIFPNQE VLKARAVDHA DEAATRKAVQ KAIATALADL PSHEQVKRFA
LLPEALSETN GELTPTLKVK RRVVAEHYAA LLTQMGSGKS
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