Gene Lferr_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0381 
Symbol 
ID6876332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp356796 
End bp357638 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID642788254 
ProductPolypeptide-transport-associated domain protein FtsQ-type 
Protein accessionYP_002218842 
Protein GI198282521 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00296108 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.100496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGCG TCATGCGCGA TTACCGACAT GGGCAGCAAC CGCAACATCC TGCCGCCACC 
CTCAGAAAAC CGCCCAGACC CAAAGCCGAG GCGGCTCCGC CCAAAGTACG CCGGGCCATT
CCGTGGCGGC TTTATGGCCG CGTGCTCTTT GGCGGAATCG GTATCAGCGC CCTCGCGTGG
GGGGGCTGGA TGGGCTGGAA CTGGGTGCGT GAACCACAGG TCATGCCCAT CAGCACCTTG
ACCATTTCTG GCATATCGGC GCGGATCCCG CTGCCCGAGG TGAACGCCGC CCTCAGACCC
TACGTGGGTC AGGGTTTTCT CTGGATCCAT CCGGATCAGG TGCGACGGGC AATCGACGCC
CTCCCGTGGG TAGCGGATGC CGAAGTCCGC CGGGTCTGGC CCGACCGGCT GCAGATCCGG
ATCAAATCCT ACACACCCGT AGCCCGCTGG CTGAGCGGTG CGGGACAGAT GGTGGATGGC
CAGGGTCAGG TGTTCAGCGT TCCCCCCCGG CAGGTACCGG CAGGACTTCC GAACCTCGAA
GGCCCGGCCG ACAGCGGTAG TGAACTGATC GCCCAACTCG CCACTTTCAA CGGTATCGTC
GCCCCGCTCG GCGTCAAGGT GACATCCCTT CAGGAAGACC GGCGCGGCGG CTGGCGCTGC
ATTCTCAGTA ATCAGGTGCG CCTGCTGCTG GGCAGTGAAA ACATCCTTCC CGCCTTGAAA
CGCTGGGTGG CCATCGCCCC CCAGGTCAAG GAATACCTCG TGCCGGGGGC CACCATGGAC
CTGCGCTACA CCAACGGCTT TGCGGTCGCC ATGCCCGCGG CGGCCACCGT CAGCAGTCAG
TAA
 
Protein sequence
MVSVMRDYRH GQQPQHPAAT LRKPPRPKAE AAPPKVRRAI PWRLYGRVLF GGIGISALAW 
GGWMGWNWVR EPQVMPISTL TISGISARIP LPEVNAALRP YVGQGFLWIH PDQVRRAIDA
LPWVADAEVR RVWPDRLQIR IKSYTPVARW LSGAGQMVDG QGQVFSVPPR QVPAGLPNLE
GPADSGSELI AQLATFNGIV APLGVKVTSL QEDRRGGWRC ILSNQVRLLL GSENILPALK
RWVAIAPQVK EYLVPGATMD LRYTNGFAVA MPAAATVSSQ