| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0361 |
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| Symbol | |
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| ID | 6876312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 338099 |
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| End bp | 338995 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788234 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002218822 |
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| Protein GI | 198282501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.746823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTCCG CTCAGTCTGA CCTCCGGCAT TGCTGGCACC CCGACGGAGG CACTTCCGTC
TATGGCATTC TGGGGTTTCC TGTCAACCAC AGCCTCTCGC CGTGGCTGCA TCGTCTCTTC
GCGGCGCAGC AGGAACTGGA TCTGGTGTAT GTGCCTTTTC CGGTGCGCGA AGAGGATATC
GCCGTGGCAC TGGCCGGTTT GCCGGCGCTC GGGATCCGGG GCGTGAATGT CACGGTCCCG
CACAAGGAGG CCGTATTGCC GCTGATGCAG TGGCTCAGCG CGGAGGCGCT GGCCATCGGG
GCGGTGAACA CCATCTGTTT CACGCCCTCG GGCATGCAAG GGCACAACAC CGATGCACCG
GGATTTTTGC GGGCGCTGGA ACGTGCGACG GGGGACGGCT GGCGGCAGTG TCCGGCGACT
GTAATCGGCG CCGGGGGGGC TGCCCGGGCC ATCGTCTACG CCCTCGGCCA TGCCGGATGT
CCGGCGATTT ATCTGGCGAA TCGCCACCTG CCGCGTGCCG AAGTTCTGGC GGCGCAGTTT
CCCGGCCTCC CGGTGCATCC CATCCCGCTG GACCGGGCGG CATTGTCCGC TGTGTTGCCC
CGCAGCAGGT TGCTCGTCAA CACCAGCACG CGAGGCCTGC ACGGCGAGGG CCATCCGGAG
CTGGATCTGG CCCGCATGCC CGGGAATGGC AGTGTGTACG ATATCGTCTA TAACCCATTG
GAAACGCCCC TGCTGCAAGC CGCCCGGCAA GCCGGGCTGG GTGCGGTGGA TGGGCTGGGT
ATGCTGGTGG AGCAGGGCGC GGAGAGTTTT CGAATATGGA CCGGAACATT GCCGCAGACC
GCCGCCGTGG AGGAGATATT GCGTCGATGG CTACAAACCC GGAACACATC TCGTTAA
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| Protein sequence | MPSAQSDLRH CWHPDGGTSV YGILGFPVNH SLSPWLHRLF AAQQELDLVY VPFPVREEDI
AVALAGLPAL GIRGVNVTVP HKEAVLPLMQ WLSAEALAIG AVNTICFTPS GMQGHNTDAP
GFLRALERAT GDGWRQCPAT VIGAGGAARA IVYALGHAGC PAIYLANRHL PRAEVLAAQF
PGLPVHPIPL DRAALSAVLP RSRLLVNTST RGLHGEGHPE LDLARMPGNG SVYDIVYNPL
ETPLLQAARQ AGLGAVDGLG MLVEQGAESF RIWTGTLPQT AAVEEILRRW LQTRNTSR
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