Gene Lferr_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0352 
Symbol 
ID6876303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand- 
Start bp331001 
End bp331912 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID642788225 
Productprotein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 
Protein accessionYP_002218813 
Protein GI198282492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.576834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGG AACAATACAT CGCCCTCGCC GGCGACACGC TGCAGACGAT CACCGATTTC 
CGGCGCTGGG GCGCCAGCCG TTTTGCCGCC GCAGGGCTCG ATTTCAGTCA GGGCCAGCAG 
CAACCCCGCG GCGAAGCCGA CGCGCTCCTG GCCGCGGCAC TGCACCTCGA GCCGGAAGAC 
CTTGGGGAAC TCGGCGCGGC ACGCCTGCTG GACCGCGAAA AAACCACGAT CTTCAAGCAC 
TTCTATCAAA GGGAAATACT CCGTCGGCCC GCCGCCTATA TTACCGGCGA AGCCTGGTTC 
GCGGGACTGC GTTTCAGCGT CGATGAACGT GTCCTCATCC CCCGCAGCCT GCTCGAACCT 
TTCATCGAGG AGGGCTTCGC GCCCTGGGTA GAGGCGTCGC AGGTGCGCCG CATTCTGGAG 
ATCGGCACGG GCTCCGGCTG CATGGCCATT ACCCTGGCCC TGCGCTTTCC GGAGGCGGAA 
GTGGATGCAG TGGACATCTC TGCAGATGCC CTCTCCGTGG CACACGCCAA TATCCGGCGT 
TACGGTCTGG AAGACCGTGT GCATCTGCAT CAGTCCGACC TCTTTGCCGC TCTGGAGGGA 
CGACGCTATG ACCTGATTCT CAGCAACCCG CCCTATGTGG ACGCGATAGC CATGGCGGAA 
TTGACCCCGG AATACCGGCA CGAGCCTCGT CTCGCCCTGG CCGCCGGTGA GGATGGTCTG 
GACTGCCTGC TCCCCCTTCT GGAGCAAGCA CCACATCACC TGGAGGGGGG CGGCGTCCTC 
GTGGTAGAAA CCGGCGATGC CGAAGAAGCC CTCATCCGCC GCCGTCCCGA CCTGCCCCTG 
ATCTGGCTGG AACATCCGGC CGGAGGTTCC GGCGCCTTTC TAGTGGTAGC CGCGGCCGAC 
GGCGGATTTT AG
 
Protein sequence
MNLEQYIALA GDTLQTITDF RRWGASRFAA AGLDFSQGQQ QPRGEADALL AAALHLEPED 
LGELGAARLL DREKTTIFKH FYQREILRRP AAYITGEAWF AGLRFSVDER VLIPRSLLEP 
FIEEGFAPWV EASQVRRILE IGTGSGCMAI TLALRFPEAE VDAVDISADA LSVAHANIRR 
YGLEDRVHLH QSDLFAALEG RRYDLILSNP PYVDAIAMAE LTPEYRHEPR LALAAGEDGL 
DCLLPLLEQA PHHLEGGGVL VVETGDAEEA LIRRRPDLPL IWLEHPAGGS GAFLVVAAAD 
GGF