Gene Lferr_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0343 
Symbol 
ID6876294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp322578 
End bp322841 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content59% 
IMG OID642788216 
ProductRNA-binding S4 domain protein 
Protein accessionYP_002218804 
Protein GI198282483 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.343465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.703045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGCC ATTTGCGCAT CGATCTTTTC CTCAAGATGT CACGTCTGAT CAAGCGGCGC 
AGTCTGGCCA AGGAAATCTG CGATGCCGGT TGTGTGCAGA TCAACGGGCG GGTCGCCAAA
GCGGGGGCGT TGGTGCAGGT GGATGATGTG TTGACCATGG ATATTCGTGA CCGTCTCCTG
CGGGTGCGGG TCTTGCGTAT TCCGCAGCGG ATCGAAGGGC CGGAAGGGGT GGTGGAAGTG
CTGCCCGGGG AGGTTGAGGA ATGA
 
Protein sequence
MAGHLRIDLF LKMSRLIKRR SLAKEICDAG CVQINGRVAK AGALVQVDDV LTMDIRDRLL 
RVRVLRIPQR IEGPEGVVEV LPGEVEE