Gene Lferr_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0337 
Symbol 
ID6876288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp318611 
End bp319435 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID642788210 
ProductABC transporter related 
Protein accessionYP_002218798 
Protein GI198282477 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.425163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG AGGCTCTTGT CGAACTGGAA AACGTGCACT TTGCCCGGGG CCCGCACACG 
GTCCTGGACG GCGTGGGTCT GCGTATCACC CAGGGGGCCA TCGTATCTAT CATGGGGGCG
AGCGGCGGTG GCAAGACGAC CCTGCTCAAC CTGATGGCCG GTACCCTCGC GCCACAGGCC
GGGCGAATAC GAGTGGCGGG TCAGGATCTG CAGGCTCTGA ACTTTGAGGA CCTGTACCGT
CTGCGTCGAC GTATGGGCAT GCTTTTTCAG CACAGCGCCC TGTTTACGGA TTTCAGCGCC
TTTGAGAATG TCGCCTTTCC CCTGCGCCGC CACTTCCGGC TGGACGAGAG CGTTCTGCGC
AAGCTGGTGC TGATGAAACT GGAGGCGGTG GGGTTGCGCG GAGCGGCCGG ATTGATGCCC
GCCGAGCTCT CCGGTGGCAT GGGTCGGCGG GTGGCGCTGG CTCGTGCCAT GGTGATGGAC
CCGATGCTGA TTTTTTACGA TGAGCCGTTT ACCGGCCTGG ACCCCATCAG TGTGGGGATT
ATTGCGACCC TGATCCGCCG CCTCAATGAC GCCCTTGGCG CGACGAGCAT CCTCGTCAGC
CACGATGTGC AGGAGACTTT TTCCATCGCG GATTACGGTT ACATCCTCGC GGGCGGCAAA
ATCATTGCCG AAGGTACGCC AGATGCCCTG CGGACCAGTG ATTCGGAACT GGCACGGCAG
TTTCTCGGGG GTAAGCCCGA TGGGCCGGTT CCCTTCCACT ACCCGGCGAA AGATGACTAT
GCTACTGCCC TGACCGGGGT ATGGGCAGCG GGCGAGGCGA TTTAA
 
Protein sequence
MAAEALVELE NVHFARGPHT VLDGVGLRIT QGAIVSIMGA SGGGKTTLLN LMAGTLAPQA 
GRIRVAGQDL QALNFEDLYR LRRRMGMLFQ HSALFTDFSA FENVAFPLRR HFRLDESVLR
KLVLMKLEAV GLRGAAGLMP AELSGGMGRR VALARAMVMD PMLIFYDEPF TGLDPISVGI
IATLIRRLND ALGATSILVS HDVQETFSIA DYGYILAGGK IIAEGTPDAL RTSDSELARQ
FLGGKPDGPV PFHYPAKDDY ATALTGVWAA GEAI