Gene Lferr_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0312 
Symbol 
ID6876262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp297792 
End bp298556 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID642788184 
Producthypothetical protein 
Protein accessionYP_002218773 
Protein GI198282452 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.26241e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAGCA TCCTGCACGC CATCCAGCCG GTACGCCATA TCTCTCTCAA AAGCTGGCGC 
GAAGATTTCG GGATAGAGAT AGCAGAGGAT ACGCCCGCCC ATCGCCTGCT CCGCGACGGT
GACGCCTGGG TGGTGCTCTT CCGATCCGGT GTCATCTGCT TTTTTGGCGC AGGACCGGCA
TTGCAGGCCA GAGTCATCGC CACCGTGCAG GCGCAGTTCA CCCCCATCGC CAGCCCCAGG
GTGGAAGAGC TCGCGATCCT GGTCGGCGAA CGTGATGGCG TGGGCCGTGA CGGCGTCACC
CTCAAGAATC TCGATGAAGA ACGCATCCTC CTGGTCGCCC TGCGTCTGGC CCAGAGCCTA
GCCCTGGAAC TCCACGAAGA GGCCGTCGAA AATCTGCTGG AAACCACCTT GAACCTGCTC
TCGGAAGTGG CCCGCACCGG GCGTTTGCCG GGATGGCGTG GCGGACATCT GCGCTTTCTC
GCCTCGACTT CCGCCACCCG CACCGAAATC CTTTCCCGTC TGGCGGTGCT GGACAACCCC
GATATCGTCT GGGAAACCCC AGGGCTGGAA CTGCTCTCCC GCGAACTCTC CGCCGACCTG
GAGCTCACCA GCCGGTTCCG CGCCCTGGAT GAAAAACTCG ACGCCATTCA TGAGGGGCTG
GAAGTCATGA TCGTGGCCAG CCGGCACCAC CGGGAGACGA TTCTGGAATG GATCATCATC
ATCCTGATAT CGGTCGAAGC GCTGATCATG CTCATGGGCA AGTAA
 
Protein sequence
MTSILHAIQP VRHISLKSWR EDFGIEIAED TPAHRLLRDG DAWVVLFRSG VICFFGAGPA 
LQARVIATVQ AQFTPIASPR VEELAILVGE RDGVGRDGVT LKNLDEERIL LVALRLAQSL
ALELHEEAVE NLLETTLNLL SEVARTGRLP GWRGGHLRFL ASTSATRTEI LSRLAVLDNP
DIVWETPGLE LLSRELSADL ELTSRFRALD EKLDAIHEGL EVMIVASRHH RETILEWIII
ILISVEALIM LMGK