Gene Lferr_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0306 
Symbol 
ID6876256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp292020 
End bp292952 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID642788178 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002218767 
Protein GI198282446 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0196114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.63412e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCACTGG AAATCCGTCA CCTGCGCACT ATGGAGGCAG TCGCCCAGTT CGGCAGCCTC 
GCCGCGGCGG CGCAACGCCT GCACCTCACC CAATCCGCGC TCTCCCACCA GTTGCGCGGG
CTGGAAGCAG AATATGGTGT CAATCTCCTG GATCGGGAAC GTGGCGCGCA GTTACGCATG
AGCCCCGCCG GAGAGGCCTT GCTCGCCGTG GCCCGGGAAG TGCTGCCGCG TATCCGGCAG
ATGCAGGAGG AACTGCGACG GCGGGCAGCA GGCAACAGCG GCCGCCTGCG TATCGCCGTC
GAATGCCATA CCTGCTTCGA CTGGCTGACG CCCGCCATGA ACCACTTTCG CGAGAACTGG
CCGGACGTGG AAATGGATCT GGTTTCGGGT TTTCAGCAGG ATCCCTTACC CCTGCTCCAG
AGCCATCAGG CCGACCTCAT GGTGTTGACC GCCCCGGACG CCATGGGCTG CGATATTGTC
GTGCACCCGC TCTTCGCTTA TGAAGTCGTC GCACTGGTCA ATCCGCGGCA CCCTCTGGCG
GAACGCAGCT TTCTGACCCC CGCGGACTTT CTGGAAGAAA CCCTGATCAC CTACCCGGTA
GAGGATCGCC GCCTCGATCT TTTTCGCGAG TTTCTCCAGC CCGCGGGTAT CCAGCCCTGG
CGGCGGCGCC ACGCGGAGCT CACCGTCATC ATTCTTCAGC TCGTCGCCTC CGGGCAGGGC
ATCGCCGCGT TACCAGCCTG GGCGGTGGGA AGTTACGGCG AAAAAAACTA TGTCCGCGCC
ATTCCTCTAG GATCGCAGGG TCTCTGGCAA ACGCTGCAAG CGGCCACCAC GGCGGAGCAG
GCGGAGCAGC CGCACATGCA GGCTTTCCTC GCCGAAATCC GCGCCAGCGT GGCGGCCAAC
CTGCTTGGGG TAAAGGATAT TTCAGGCTTA TGA
 
Protein sequence
MPLEIRHLRT MEAVAQFGSL AAAAQRLHLT QSALSHQLRG LEAEYGVNLL DRERGAQLRM 
SPAGEALLAV AREVLPRIRQ MQEELRRRAA GNSGRLRIAV ECHTCFDWLT PAMNHFRENW
PDVEMDLVSG FQQDPLPLLQ SHQADLMVLT APDAMGCDIV VHPLFAYEVV ALVNPRHPLA
ERSFLTPADF LEETLITYPV EDRRLDLFRE FLQPAGIQPW RRRHAELTVI ILQLVASGQG
IAALPAWAVG SYGEKNYVRA IPLGSQGLWQ TLQAATTAEQ AEQPHMQAFL AEIRASVAAN
LLGVKDISGL