Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0283 |
Symbol | |
ID | 6876233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 266349 |
End bp | 268403 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788155 |
Product | DNA topoisomerase III |
Protein accession | YP_002218744 |
Protein GI | 198282423 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.860324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGT ACATCGCCGA GAAGCCCAGC CTGGGCAAAG GGATCGCCGA GTATTTGCCC GGATCGAAGA GCAAAGGGAA CGGCTTCATC CAGTGCGGAG TGGATACCGC CGTGACCTGG TGTTTCGGCC ATATATTCGA GCAGGAAGAG CCGGACTTCT ACACGCCTGA TGATGTTCCC ACCACGCCAA AGGGCAAGAA GAAATGGCGC TTTGAGGAAC TGCCCATTTT TCCTGAGCAA TGGAAGAAGC GGGCAAAAGA TGACGCCAAG GCCCAGATCA AGGTGATCCG GGACCTGCTC AAGAAAGCGT CGTCTGTCGT CAACGCAGGA GACCCGGACC GAGAGGGCCA GCTGCTGGTG GATGAGGTAC TGGAAGAGCT CCGCTGGAAA GGGCCTACGC AACGCATTTG GCTGGCCGCC CTCGATGAGC AGTCCGTGCG CAAGGCGCTG GCCAGTCTGA AGGACAACCG GGACTATCAG AATCTCAGCC ATTCTGCCGA GGCCCGCGCC CGCGCGGACT GGCTCATGGG CATGAATCTC ACCCGCGCAT TCACGCTGCG CAACAGCGGC GCCGGAGTCG TCTCCGTGGG TAGGGTGCAG ACGCCAACGC TGGCTCTGGT CGTGGCCCGT GACGAGAAGA TCGAGCACTT CAATCCGAAG GACTACTACG TTCCGCGCAT CAACGCGGGC TTCTGGGCCG CCTGGGAGTT GCGGGAGGAT TTCGAGGGTG TCGATGCCGA AGGCTACCTC ACCGACCGGA AAGCTGCTGA CCGGCTGGCA TCCCGGGCCA AGGCGGAAGG CAAGGCGACG GTGAAGGACT TCACCAGCGC CGAAAAGCAG CAGCAGGCCC CATTAGGCTT CTCCCTTGCG GAGTTGCAAA AGGTCTGCTC AGCCAAGCTC GGCATGTCGG CACAAAATGT CCTTGATGCG GCCCAAGCGC TGTACGAGGA ACACAAGGCG GCGACCTATC CGCGGACCGA TTGCCGCTAT CTACCGGAAG AACAGCATGG GGATGCCGGA CAGATACTGT CCGGCCTGGC GAAAGCTGGA TTTGCGGATC TGGTGAAAGC CGCCGATTCC AACCGGAAGT CGGCCATCTG GAATACGGGC AAAGTGACGG CGCACCACGC CATCATTCCG ACCGGCTCCA TGCAGGGCTC CATGAGCCCG GCAGTGGCCA AGGTCTACGA GATCATCGTC CGCTCCTATC TCGCGCAGTT CTATCCGCCC TATGTGTACC GGGCGATCAA GGCCCTACTG ACTTGCACCG GCGAGGACTG GAAGGCGACT GCCAACATCC CGGTATCCGC AGGCTGGAAA GCCGTGTATG GGATGACCGA TGACGATAAT GATGACACCC CCGCCCAGTC GATCCCGCCG CTCAAAAAGG GACAGAGCCT GACGGTTCAG GATGCGGACG TGCAGGCAAG GCAGACCAAG CCGCCGGCAC GATTTACGGA TGGATTGCTC ATTGAAGCCA TGAGCAACAT CCACAAGGTG GTTGAGGACG AGGCCGCCAA GGCCAAGCTC AAGGAAACCT CTGGCCTAGG CACGGAGGCC ACCAGGGCCA GCATCATCGA AACACTGCTA ACCCGGGGAT TCCTGGAGCG CAAAGGCAAG CAGATTCTCT CCACGCAGGC CGGGCGGGCG CTGGTTCACG CGCTACCCAA AGACCTGACC GATCCCGTCC TGACAGCCCG CTGGGAGGAT GCTTTGTCAT CCGTTTCCGA AGGCCGCGTG ACGCTACAGC AGTTTGAGGA AGCGCAGCGT AAATTTGTTG TCCGCATGAT CGAGGCGGCC AAGGCGACGA CAGTTGCTGT CGGCCAGGCA CGGCCATCTT CCGGCGCTGG TCGTGGCAAG TCGTCTACCG GAAAAACGCG GGGCGGCGGA CAAAAGGCTG GCCCAGCCTG CCCGGACTGC AAGAAGCTGA CCATCACCCT GAAGACGAAG AAGGGAAGTG CCTTCTTCAA GTGCGAGGGC TGCCAGTCCT GCTGGTGGCC GGACAAGCAG GAACCCAAGA AGCTCGGAAC GAAGTGGGGT GAGAAAAAAA CATGA
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Protein sequence | MKLYIAEKPS LGKGIAEYLP GSKSKGNGFI QCGVDTAVTW CFGHIFEQEE PDFYTPDDVP TTPKGKKKWR FEELPIFPEQ WKKRAKDDAK AQIKVIRDLL KKASSVVNAG DPDREGQLLV DEVLEELRWK GPTQRIWLAA LDEQSVRKAL ASLKDNRDYQ NLSHSAEARA RADWLMGMNL TRAFTLRNSG AGVVSVGRVQ TPTLALVVAR DEKIEHFNPK DYYVPRINAG FWAAWELRED FEGVDAEGYL TDRKAADRLA SRAKAEGKAT VKDFTSAEKQ QQAPLGFSLA ELQKVCSAKL GMSAQNVLDA AQALYEEHKA ATYPRTDCRY LPEEQHGDAG QILSGLAKAG FADLVKAADS NRKSAIWNTG KVTAHHAIIP TGSMQGSMSP AVAKVYEIIV RSYLAQFYPP YVYRAIKALL TCTGEDWKAT ANIPVSAGWK AVYGMTDDDN DDTPAQSIPP LKKGQSLTVQ DADVQARQTK PPARFTDGLL IEAMSNIHKV VEDEAAKAKL KETSGLGTEA TRASIIETLL TRGFLERKGK QILSTQAGRA LVHALPKDLT DPVLTARWED ALSSVSEGRV TLQQFEEAQR KFVVRMIEAA KATTVAVGQA RPSSGAGRGK SSTGKTRGGG QKAGPACPDC KKLTITLKTK KGSAFFKCEG CQSCWWPDKQ EPKKLGTKWG EKKT
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