Gene Lferr_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0234 
Symbol 
ID6876184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp219051 
End bp219515 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID642788110 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_002218699 
Protein GI198282378 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.844329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC TCTCTCCCAC CCATTCGTTG CCTACGGCCG AAGAAGTTGC CATCGCCCGC 
GAGAGCGGCC GGGCACTGTC CGCCTTCCTT CAGACCCGCG CGGAAACCCA GCAGATCGAG
ATATTCAACG ACAAGGGCGC GTCTCATTCG GTCCGCGTCC CGGTGTCGGC GCTGCGCCTT
CTCGTGGACG TACTGACCGA AATCGGTGAG GGCAACGCGG TCAGTATCAT CCCGATCCAC
GCCGAACTGA CAACGCAAGA CGCAGCGGAC GTACTCAATG TCTCGCGACC GTTCCTCGTC
CAGTTGCTGG AGCGCGGCGA GATCCCGTTC CACAAGATCG GTACTCACCG TCGTGTCCGC
TACCAGGACG TGATCGCGTA CAAGGAGCGG ATCGACGCTG AGCGCAGCAA GGCCCTTGAT
GCACTGGCCG AGCAAGCCCA GGCGCTCAAG ATGGGGTACG AATGA
 
Protein sequence
MTTLSPTHSL PTAEEVAIAR ESGRALSAFL QTRAETQQIE IFNDKGASHS VRVPVSALRL 
LVDVLTEIGE GNAVSIIPIH AELTTQDAAD VLNVSRPFLV QLLERGEIPF HKIGTHRRVR
YQDVIAYKER IDAERSKALD ALAEQAQALK MGYE