| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0227 |
|---|
| Symbol | |
|---|
| ID | 6876177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 213578 |
|---|
| End bp | 214765 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642788103 |
|---|
| Product | restriction modification system DNA specificity domain |
|---|
| Protein accession | YP_002218692 |
|---|
| Protein GI | 198282371 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGAGG GGTGGGAGGT TAAGCTCCTT GGCGAAGTTT CTGCCATAGG AGCGGGCAAC
CCAGCCCCTC AAGATCGGCA TTACTTTGAG CAAGGCACGA TCCCTTTTAT TCGGACGTCA
GATGTTGGCA GAATACATAT TGGAGAGATC TTCGGCGCTG CTGATTTAGT AAATGAACTG
GCAGCACGTA AACTAGCAAT GCTGCCTGTA GGTACGATTC TTTTTCCAAA AAGCGGTGCA
TCCACATTTA TAAATCATAG GGTAATAATG GGTATTGAAG CGGTTGCTTC TAGTCACCTA
GCCACCATTA AGGCAAAACC CCATACTCTA TTAGATAAAT TTCTTTTCTA TTATCTGCTC
ACGATTGACG CTAAGACACT TGTCGCAGAC AGTAATTATC CTTCTTTGCG AATTTCTGAC
ATAGCAACAA TATCTACGCC GCTTCCACCC CTCCCCGAGC AGCGCCGCAT CGTCGCCATT
CTCGACGAAG CCTTTGAAGG CATAGCAACT GCAAAAGCGA ACGCCGAGAA GAATCTCCAG
AATGCCCATG AGATCTTTGA GAGCTATCTG AATGCGGTAT TTTCGCAGCG GGGTGAGGGG
TGGGTAGATC GGCGATTAGG TGATGTGGCC ATGGAATTTG GACGTGGAAA ATCAAAACAT
CGGCCCCGTA ACGATCCTAA GCTTTACGGC GGAAACTTTC CATTCATTCA AACTGGAGAC
GTGCGCAACT CAAGCCATCT AATCACTTCT TACGATCAAA CTTATAACGA TGCAGGTCTG
GCGCAGAGCA AACTTTGGCC TAAAGGTACT CTTTGCATAA CCATTGCAGC AAACATTGCG
GAGACAGGCA TCCTAGATTT TGACGCTTGC TTCCCAGATA GCATTATTGG ATTAGTCGCT
AACGAAAAAA TATCCACCAA TAAATATATA GAGTATCTGC TTACTAGTTT CAAATCTCGC
TTGCAGTTTC TGGGAAAAGG AAGCGCGCAA GATAACATAA ACCTGGCGAC TTTTGAAAGC
CAATATTTCC CGTTCCCGCC ATTAAGTAAT CAAAAAGAAA TTGTATCCAT ATTTGACGAT
TTACATGAAG AAACCCAACA CCTCAAATTC ATCTACCAGC AAAAACTCGC CGCCCTCGAC
GAGCTGAAAC AATCCCTCCT ACACCAAGCC TTTAACGGCG ACTTATAG
|
|---|
| Protein sequence | MREGWEVKLL GEVSAIGAGN PAPQDRHYFE QGTIPFIRTS DVGRIHIGEI FGAADLVNEL
AARKLAMLPV GTILFPKSGA STFINHRVIM GIEAVASSHL ATIKAKPHTL LDKFLFYYLL
TIDAKTLVAD SNYPSLRISD IATISTPLPP LPEQRRIVAI LDEAFEGIAT AKANAEKNLQ
NAHEIFESYL NAVFSQRGEG WVDRRLGDVA MEFGRGKSKH RPRNDPKLYG GNFPFIQTGD
VRNSSHLITS YDQTYNDAGL AQSKLWPKGT LCITIAANIA ETGILDFDAC FPDSIIGLVA
NEKISTNKYI EYLLTSFKSR LQFLGKGSAQ DNINLATFES QYFPFPPLSN QKEIVSIFDD
LHEETQHLKF IYQQKLAALD ELKQSLLHQA FNGDL
|
|---|
| |