Gene Lferr_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0205 
Symbol 
ID6876155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp194997 
End bp195698 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID642788082 
ProductABC transporter related 
Protein accessionYP_002218671 
Protein GI198282350 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA CTTCTGAAAC CGTGATTCGT GTCGCTAACG TGAGCAAGGT CTACGGCACC 
GGCGAGGCGG CCTCGACCGC GTTGTCTGAA ATCAGCCTCG ACGTGGCGCG TGGTTCCTGG
GTGGCCGTGA TGGGCCCGTC GGGACACGGC AAGAGCACGC TGCTCCAGAT CATGGGCGGC
CTCGACCGGC CTTCTCGTGG GCAGGTTTAT CTGGACGGCA TCGAGCTCAG CACCCTCGGT
TCCGCGCAAC TTGCCCACAC GCGGGCGCGG GCGATCGGGT TCGTGTTCCA GTCCTTCAAT
CTTCTGCCGC ATCTGACGGC ACTGGAGAAC ATCCAGCTCG CACTGTGGTT CGGCGGCAAG
GAGAGCAAAG AAGGCCACGC GCGGGCGATG GCCCTGCTTG ATTCGGTGGG ATTGGCAGAC
AAGGCGCATC TTACCCCCGG CGCGCTCTCT GGTGGCCAGC AGCAGCGTGT GGCGGTGGCG
CGCGCGCTCG CCAATGATCC AGACATCCTA TTGATGGACG AGCCCACCGG CAACCTCGAC
TCGGCTTCCG AAACTGACCT GCTCGCGCTG CTCGGGCGCC TGCACGCGCA GGGGCGAACC
ATCGTCATGG TCACCCACAA CCCCGCCGTG GCGGAGTGTG CGCAGCGTAT CGTGCGCGTG
AAGGACGGGC GCGTCGAGGA GGATCACCAT AATGGCAATT AG
 
Protein sequence
MSETSETVIR VANVSKVYGT GEAASTALSE ISLDVARGSW VAVMGPSGHG KSTLLQIMGG 
LDRPSRGQVY LDGIELSTLG SAQLAHTRAR AIGFVFQSFN LLPHLTALEN IQLALWFGGK
ESKEGHARAM ALLDSVGLAD KAHLTPGALS GGQQQRVAVA RALANDPDIL LMDEPTGNLD
SASETDLLAL LGRLHAQGRT IVMVTHNPAV AECAQRIVRV KDGRVEEDHH NGN