| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0183 |
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| Symbol | |
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| ID | 6876133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 171700 |
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| End bp | 174798 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788060 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002218649 |
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| Protein GI | 198282328 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAG CCATCATTCG CTTCTCCATC CGCTTTCGCG GGGTGATCCT TGCCCTGGCG
CTTTTAGTGG CCGGTTATGG CCTCTATACC CTTTCCCAGG TGAAGCTGGA CGCCTTCCCC
AGTTTCACGC CGCCGCTCGT AACCCTGGTA ACGGAAGCCC CGGGCCTGTC GCCCGAGCAA
GTGGCGGCCC TGGTCACCCA ACCTATCCAG AACGCACTAT CCGGGACAGC CGGTTTGCAG
GCCATGCGTT CGCGGTCCAT CCAAGGCCTG TCGGTGATCA CCTTGACGTT CCACAATGGG
ACGGACATTT TCCGGGACCG CCAGATCGTG GCCGAACGGT TGAACACCGT CGCCGGACAG
TTGCCGCTCG GGGTGCGCGC GCCTTTCCTG ACCCCCCTGA CGTCGGCAAC GGGCGTCGTC
CAGGTGCTGG GCCTTACGTC GGATACCCGC TCGCTCATGA CCCTGCGTAC CTTGGCCGAT
TGGCTGCTCA AGCCGCAGTT GCTGAGCATC CCCGGCGTGG CCAATGTCGC CATCTACGGG
GGGCAGGTGC GCGAACTGCA GATCCAGGTG CAACCGGAAA AGCTGGTACG GTTTGGATTG
TCGTTCCAGG ATGTCGTCCG TGCCACGCAG CGGGCCACCG GGGTACGAGG GGCTGGTTTC
CTGGAGGATG TCAACCAAAG GATCGCCATC CGTACCGAGG GCCAAAGCAT CACTGCCGCC
CAGTTGGCGA ACGTGGTCAT CCTGCGCCGC CAGGGCGCGG ATCTCCGTTT GGGCGATGTG
GCGCAGGTGG TGGCGGCGCC GGCGCCGGCC ATCGGCGGTG CCACCATAGA GGGTAAGCCG
GGGGTCATCC TCAACGTCGA GGAGCAATAC GGTGCCAATA CCCTGGCGGT GACCAGGGCA
TTGAAGGATC GGCTCCAACA GCTTGGCCCA GTGCTGGCGG CGCAAGGAGT GTCCCTGCAT
CCCGATCTTT TCGGGCAAGC CAGTTACATA GAAACCGCCA TTGCCCACCT GCGCACGGCG
CTGCTGGTAG GAGCCATTCT GGTCATTACC GTGCTCTTTC TTTTTCTATT CAATGCGCGC
ACCGCCTTGA TATCGGCGAC TGCCATCCCC CTTTCGCTGC TTACCGCGAT CATCGTTCTC
AATGCGCTCG GCGCCAGCAT CAATACCATG ACCTTGGGTG GACTCGCCAT CGCCATCGGC
GAAGTGGTGG ACGACGCCAT CATCGACGTC GAGAACATCT TTCGGCGCCT GCGGGAAAAC
CGCGCCCGAG CACAGCCCTC ATCCATCGCG AAAGTGGTGC TCGCTAGCTC CCTGGAGGTG
CGCGGGGCGG TGACGTATGC CACCTTTATC GTGGCCTTGG TCTTCGTGCC GGTGCTGTCG
CTCTCCGGAG TGGCCGGCAA ACTCTTCGCG CCGCTGGGCG AAGCGTATAT CGCGGCCGTG
TTCGCCTCCT TGGCGGTGGC GCTGACCGTG ACCCCTGCCC TGGCTTATCT ACTGCTGGGG
CGCACACAAC CCCGCCCGCT GGATCCTGCC TGGCTCTGCA AGCTCAAGGA GGTCCAGGCA
CGGCTGCTTA CTCGCGCCGA GCGCCACAGC CGCTTGCTGA TCGTGGGGAT TATGTTACTG
TTCCTGGCGG CGATGGCCGT CTTGCAGTCG TTCGGAAGCA ATTTCCTCCC GGAATTCAGG
GAACGGCATT TCATCGTGCA TGTATCCACC GAACCGGGGA CCTCGCTTGC CGAGTCGATA
CAGCTTGGGC GTCACATTTC CACGGCCCTG AGCCGCATCC CCGCCATCCG CTCGGTGGCG
CAGCGGGTGG GACGGGCGGA GAGGACGGGT ACGGATACTT ACGGCGTCAA CGTGAGCGAA
TTTATCGTCG GCCTCAAACC CCTTTCCGGG CATGCACAAG AGCAGGTCCT GGCCCGGATC
CGCAAAACCC TGTCGGGGTT TCCAGGGGTG AACTCCTCCG TCGAGACGCC TTTGTCGGAC
CGTATTGAAG AGACGATCTC CGGTTACACC GCACCGGTGG TGGTCAGCGT CTTTGGCACG
AATTTCAATC TGCTTTATGA AAAAGCGCGG GAAATCGCCT CAGTTCTCGA GCAGTTACCC
GGCGCAGTAG ACGTGCAGAT GCACGCCCCT CCAAGTGCGC CGCAACTGAC CATTCGCCTT
CGACGGACGG CGTTGGCCCG TTGGGGATTC GAGCCGGTGG ATGTACTCGA CGCGATCCAG
ACCGCCTATG CGGGCAGCAT CGTTGCGCAA ACCTACCAAG GGAACCGCGT GTTCAATGTG
GTAGTCACAT TGGATACTGC TGAGCGGCGG AATCCAGCGC AGGTGGGCAA TCTGCCCTTG
CGCAATCCCA ATGGATTGAT GGTCCCCCTG CGGGATTTGG CCGATATTTA CGAAGGCGTT
GGACCCTATG CCATTCTCGA AACCGCAGGG CAGCCCGTGC AGACCGTCAC CGCGGCCGTT
CATGGTCAGG CGTTGAGCGA GTTCGTGCAT GCGGCCGAAC ACCGGATCCA CAAGGATATT
TCTTTCCCCC CTGGAACCTA TGTAGTGTTT TCTGGCGCCG CGGAGGCACA GGCGAAAGCG
CAAAGCGAAC TGCTCATGCA TGCGCTGATG GCGGGAGTGG GTATTGTTCT CCTGCTCTTC
ATCGCCCTGC GCCGCGCGCG CGCCTTGTTC CTGGTACTGC TCAATCTGCC CTTCGCCCTG
ATCGGCGGGG TAACCGCCGT GCTGCTTACC GGCAGCGTGC TGTCCCTCGG TTCGCTGGTG
GGCTTCGTGA CCATCTTCGG CATCACCTTG CGCAATTCCA TCATGCTGAT TTCCCATTAC
CAGCATCTGG TTGAGGTGGA AGGCATGTCT TGGGGGCGGG AGGCGGCGAT TCGCGGCGCC
CAGGAGCGGC TGGTACCCAT TCTCATGACG GCCTTGGTCA CGGCCTTGGG CCTGCTGCCC
TTGGCGCTCA CCAGCGGGGC GCCGGGCAAC GAGATCGAAG GACCCATGGC ACAGGTCATC
CTCGGCGGCC TGATCACCTC TACCGCCTTG AACCTGCTGG TGCTGCCCAT TATGGCTTTA
CGCTTCGGGC GCTTCGTCCC GGTCGACCGT TATGACTGA
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| Protein sequence | MLKAIIRFSI RFRGVILALA LLVAGYGLYT LSQVKLDAFP SFTPPLVTLV TEAPGLSPEQ
VAALVTQPIQ NALSGTAGLQ AMRSRSIQGL SVITLTFHNG TDIFRDRQIV AERLNTVAGQ
LPLGVRAPFL TPLTSATGVV QVLGLTSDTR SLMTLRTLAD WLLKPQLLSI PGVANVAIYG
GQVRELQIQV QPEKLVRFGL SFQDVVRATQ RATGVRGAGF LEDVNQRIAI RTEGQSITAA
QLANVVILRR QGADLRLGDV AQVVAAPAPA IGGATIEGKP GVILNVEEQY GANTLAVTRA
LKDRLQQLGP VLAAQGVSLH PDLFGQASYI ETAIAHLRTA LLVGAILVIT VLFLFLFNAR
TALISATAIP LSLLTAIIVL NALGASINTM TLGGLAIAIG EVVDDAIIDV ENIFRRLREN
RARAQPSSIA KVVLASSLEV RGAVTYATFI VALVFVPVLS LSGVAGKLFA PLGEAYIAAV
FASLAVALTV TPALAYLLLG RTQPRPLDPA WLCKLKEVQA RLLTRAERHS RLLIVGIMLL
FLAAMAVLQS FGSNFLPEFR ERHFIVHVST EPGTSLAESI QLGRHISTAL SRIPAIRSVA
QRVGRAERTG TDTYGVNVSE FIVGLKPLSG HAQEQVLARI RKTLSGFPGV NSSVETPLSD
RIEETISGYT APVVVSVFGT NFNLLYEKAR EIASVLEQLP GAVDVQMHAP PSAPQLTIRL
RRTALARWGF EPVDVLDAIQ TAYAGSIVAQ TYQGNRVFNV VVTLDTAERR NPAQVGNLPL
RNPNGLMVPL RDLADIYEGV GPYAILETAG QPVQTVTAAV HGQALSEFVH AAEHRIHKDI
SFPPGTYVVF SGAAEAQAKA QSELLMHALM AGVGIVLLLF IALRRARALF LVLLNLPFAL
IGGVTAVLLT GSVLSLGSLV GFVTIFGITL RNSIMLISHY QHLVEVEGMS WGREAAIRGA
QERLVPILMT ALVTALGLLP LALTSGAPGN EIEGPMAQVI LGGLITSTAL NLLVLPIMAL
RFGRFVPVDR YD
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