| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0154 |
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| Symbol | |
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| ID | 6876104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 144897 |
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| End bp | 146084 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788033 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002218622 |
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| Protein GI | 198282301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.858222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAT TCCTGTCGTG CCGCAGGTTG GCCTGCTGGG CCACGGGCTT GCTCATGGTC
CTTCCGGCGG TTTCGGCGTC CGCTGCTCCA ACGGGGATTC CGGCAGCGAC CCACGCATCA
TTGTCCTCCC TACCCCTGTC GGCCGCCTTC CTGCCCGCCT ATCAACAGTG GTTCGATGGG
CTAGCCTGGG CGGCCCATAT CGACACGGAG ACGGTATCGA ATCTGGTCGG CGGCATCGCC
CCGGGAACGG TCGCGATCCT GGTGGGTCAC GCCGGCTTTT CCTATCACAC CGCCCGCGCA
GGTCTCTGGA CGGGCGGCAA GTTCACGCTG AACGTGCTCG GCATCGAGAG CGGGAATCCG
GAGGATAGGG TAGGGGATGT CCAAGGCGTC AGCAATCTGT ATGCGCGCAG CCAGTTTCGG
CTCTATCGTC TGACGTTCCG GCAGCACCTC GGACCAGCCA CCCTGCGTCT TGGACTGATG
AGCGCCAATG ATTACTTTGA CGTCACCGGG CAAGCGGCCC AACTCATCAA CAGCTCCTTC
GGCATCACCC CCACCCTGAG CGGCAATATA CCGGGGATGG CGACCTATCC CTACTCGGGG
CTGGGCGTCA TGACGGCGGT CCATGGTGGT GCATGGGAGG CCAAGGCGGG CTGGTATCAG
GGTGACCCCA TTCACCCCTT CTCCGATCCC TTCGGTCAGG GCGATATGGC GTTGGCGGAA
CTCGATTACC GCAACACGAA GCAGGAGCGA ACCTATGTCC TCAAACTCGG TGCCTGGCAC
TACCAGCAAC GCGCGATCTA CAACGCCGTA TTGGGACCGC GCACCAGCGG CCTGTACGCC
GTGGCCGAAT ACGCCGAACC ACTTCCGCGC GGCCGCAGGC TCGGCCTCTT CCTGCAGGCG
GGTTCCACCC CGCAGAGCGT CAACCTTATT CCTTACTATC TGGGGGCCGG CTTCCGGGTC
AAGGGGTTGT TACCCGGGCG CGGGGCGGAT GTATTCAGCA TGGGGATGAC GCGGGCCTGG
TTGCGCAACG CACCGTATCC GGCGGAGACC GCCTGTGAAA TCACCTATGC CGCCCAAGTG
GTGCCCCACA TCTTCTTACA ACCGGATCTT CAATGGGTCG TTCATCCCGG CGGTCTCTAC
CCCAACGCCC TGGTGGCGGG CCTGAGCTTG CATGTGCAGC TTTTTTGA
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| Protein sequence | MNRFLSCRRL ACWATGLLMV LPAVSASAAP TGIPAATHAS LSSLPLSAAF LPAYQQWFDG
LAWAAHIDTE TVSNLVGGIA PGTVAILVGH AGFSYHTARA GLWTGGKFTL NVLGIESGNP
EDRVGDVQGV SNLYARSQFR LYRLTFRQHL GPATLRLGLM SANDYFDVTG QAAQLINSSF
GITPTLSGNI PGMATYPYSG LGVMTAVHGG AWEAKAGWYQ GDPIHPFSDP FGQGDMALAE
LDYRNTKQER TYVLKLGAWH YQQRAIYNAV LGPRTSGLYA VAEYAEPLPR GRRLGLFLQA
GSTPQSVNLI PYYLGAGFRV KGLLPGRGAD VFSMGMTRAW LRNAPYPAET ACEITYAAQV
VPHIFLQPDL QWVVHPGGLY PNALVAGLSL HVQLF
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