Gene Lferr_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0139 
Symbol 
ID6876089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp128217 
End bp129107 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content57% 
IMG OID642788018 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_002218607 
Protein GI198282286 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAC ATCCGCCATT CCCCTGGCTG GGCGGCAAGG GAAAGCTGGC TGACCAGATT 
CTTGCCCGGC TTCCCGAGCC GTCGCGGGAA CTGACCTATG TTGAACCCTT CTTTGGTGGC
GGAGCGGTAT TCTTTGCCCG TCGTCCCTCC GGCATCGAGG TTATCAATGA CGCCAATGGC
GAGATCGTGA CCTTCTTTCG TGTGCTCCGA GACCGCACAG ACGAACTGAT CCGGTACTTG
CAGAATACCC CCTACTCGCG CCAACTGTTT TATGAGTGGC GGGCCATTCC GGACCCGGCA
AGCCTGTCAG ACCTCGAACG CGCCGCCCGG TTTTTCTATA TCGCCAGATC CGCGTTCGCC
GCCGAGTCCA CCCGCAAAAA TCCGGCGTGG GCCTTTGCCA AGGTTTTTGA CAATAAGGCT
CGGTCCATGG CCGCCGTCAT CGATTCGGAA TTGCGATTGG TTCGGGATCG GCTGCGGTAT
GCGCTGATCG AGAACGATGA TGCCATTGCG GTGGTCCGGA GATTCGACAG CCCATCGGCT
GTCATCTACT GTGATCCGCC TTATCTCCAG GCTACGCGCA GAGACGGGCA GTATGCCGAT
GAGATGAGTG ACCAGGACCA TGAGAACCTG CTTCGGGTGC TCTGTGCATG TGATGCCTAT
GTCGCGATTT CTGGCTATCC CAGTGATTTA TATTCGGATC ATTTGGAGTC CGGGCAAGGA
TGGTCCTTTG TGGATTTTGC CCACTCCTGT CACGCGAACC GGTCAGGGCG AGCCGGTGAA
GATATTGATC GAGATCGGAC AGAAAGGATC TGGATGAATC CACGCCTTAC GCAGTGGTAT
GAGCGGCACG CCCCGCGCCA GTGTTCCCTG TTGGATCTGT GCGCAGTGTG A
 
Protein sequence
MSVHPPFPWL GGKGKLADQI LARLPEPSRE LTYVEPFFGG GAVFFARRPS GIEVINDANG 
EIVTFFRVLR DRTDELIRYL QNTPYSRQLF YEWRAIPDPA SLSDLERAAR FFYIARSAFA
AESTRKNPAW AFAKVFDNKA RSMAAVIDSE LRLVRDRLRY ALIENDDAIA VVRRFDSPSA
VIYCDPPYLQ ATRRDGQYAD EMSDQDHENL LRVLCACDAY VAISGYPSDL YSDHLESGQG
WSFVDFAHSC HANRSGRAGE DIDRDRTERI WMNPRLTQWY ERHAPRQCSL LDLCAV